Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2836 82.4 5e-11 >seq2836 Length=5357 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||||| || ||| ||||| ||||| ||||| ||| | || |||| || Sbjct 2888 AACGAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTAAGCGTGCGGCCATCCTC 2947 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || |||||||| || || || || ||||| | || | ||||||||||| Sbjct 2948 AAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGAATACCCTCCTTGTCCTG 3007 Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 |||||| || || || || |||| || | ||| || |||| || || || Sbjct 3008 AATCTTAGCCTTAAC--ATTCTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATAGTC 3065 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| |||||||| || || | ||||||| Sbjct 3066 TTGCCCGTAAGAGTCTTGACGAACACCTGCATA 3098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324620693988336