Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq974 100 2e-16 seq2836 91.5 1e-13 seq3174 86.0 5e-12 >seq974 Length=24368 Score = 100 bits (110), Expect = 2e-16 Identities = 149/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || ||||| ||| || || || ||||| ||| ||| | ||| | || || | |||| Sbjct 106 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCACTCAGAGTACGACCATCCTCGAGCTGC 165 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || ||||| || || |||||||| |||| ||||| ||||||||||| |||||| Sbjct 166 TTGCCTGCAAAGATAAGGCGCTGTTGGTCCGGGGGAATACCCTCCTTGTCTTGGATCTTT 225 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | | || |||| ||| || || | || ||||| ||||| ||| Sbjct 226 GCCTTGACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTTCCTGTC 285 Query 48744 AAAGTTTTTACAAAAATCTGCATCGTGTGT 48773 | ||| ||||| |||| |||||| |||||| Sbjct 286 AGAGTCTTTACGAAAACCTGCAT-GTGTGT 314 >seq2836 Length=5357 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || ||||| ||| || || || ||||| || ||| | ||| |||| |||| ||| Sbjct 2667 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCTTCCAGTTGC 2726 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 |||||||| || ||||| ||||| || |||| ||||| |||||||||||| ||||| Sbjct 2727 TTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 2786 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | || || |||| ||||| |||| ||| ||||| || || || Sbjct 2787 GCCTTGACGTTCTCGATAGTGTCGGACGATTCCACTTCCAGCGTGATCGTCTTACCAGTG 2846 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | || || || || | |||||| Sbjct 2847 AGTGTCTTGACGAACACCTGCAT 2869 Score = 82.4 bits (90), Expect = 6e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || || | |||||| |||||||| ||||| |||||||| |||| ||||| ||||||||| Sbjct 2943 TCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGAATACCCTCCTTG 3002 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || |||||| || ||| | | | || || | ||| ||||| | ||| || Sbjct 3003 TCCTGAATCTTAGCCTTAACATTCTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATA 3062 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| | ||| || || || | |||||| Sbjct 3063 GTCTTGCCCGTAAGAGTCTTGACGAACACCTGCAT 3097 >seq3174 Length=2799 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || ||||| ||| || || || ||||| || || | || | || || | |||| Sbjct 423 TGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCATCCTCGAGCTGC 364 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 ||||||||||| ||||| |||||||| |||| |||| |||||||||||| ||||| Sbjct 363 TTACCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTG 304 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | | || |||| ||| ||||| | |||||||| || ||||| Sbjct 303 GCCTTGACATTCTCGATGGTGTCCGACGACTCGACCTCGAGGGTAATCGTCTTACCCGTG 244 Query 48744 AAAGTTTTTACAAAAATCTGCATCGTG 48770 | || || || || | ||||| ||| Sbjct 243 AGGGTCTTGACGAACACTTGCATGGTG 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380922455587626