Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2836 98.7 6e-16 seq974 96.9 2e-15 seq3174 95.1 8e-15 seq1001 87.8 1e-12 >seq2836 Length=5357 Score = 98.7 bits (108), Expect = 6e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGC-TGCGCTCATC 34824 ||||| ||||||| || ||||||||| ||||| ||||| | || || |||| |||| Sbjct 2430 AGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTC-GCTAAGCGTGCGGCCATC 2488 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || || |||||||| || || ||||| | || | ||||||||||| Sbjct 2489 CTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTC 2548 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | |||| || | |||||| || | || || || Sbjct 2549 CTGGATCTTCGCCTTGACGTTCTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATAGT 2608 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| ||||| || ||||| || || | |||||| Sbjct 2609 CTTGCCCGTAAGAGTCTTGACGAACACCTGCAT 2641 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| || ||||||||| ||||| ||||| || | || | || Sbjct 2658 AGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCT 2717 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||||||||| |||||||||||||| || |||||||| | || | ||||||||||| Sbjct 2718 TCCAGTTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 2777 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | || || || | || || ||| Sbjct 2778 TGGATCTTGGCCTTGACGTTCTCGATAGTGTCGGACGATTCCACTTCCAGCGTGATCGTC 2837 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| ||||| || || | |||||| Sbjct 2838 TTACCAGTGAGTGTCTTGACGAACACCTGCAT 2869 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGC-TGCGCTCATC 34824 || || ||||||| || |||||||| ||||| ||||| | || || | || |||| Sbjct 3342 AGAACGAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTC-GCTAAGCGTACGGCCATC 3400 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || |||||||| ||||| |||||||| || |||||||| | || | ||||||||||| Sbjct 3401 CTCAAGTTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTC 3460 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || || ||| | |||| || || |||||| || | || || || Sbjct 3461 CTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATAGT 3520 Query 34945 CTTTCCCGTGAGGGTCTT 34962 ||| ||||| || ||||| Sbjct 3521 CTTGCCCGTAAGAGTCTT 3538 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGC-TGCGCTCATC 34824 || || ||||||| || |||||||| ||||| ||||| | || || |||| |||| Sbjct 2886 AGAACGAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTC-GCTAAGCGTGCGGCCATC 2944 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||| |||||||| || || ||||| | || | ||||||||||| Sbjct 2945 CTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGAATACCCTCCTTGTC 3004 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | || || || || || || |||| || | |||||| || | || || Sbjct 3005 CTGAATCTTAGCCTTAAC--ATTCTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATA 3062 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| || ||||| || || | |||||| Sbjct 3063 GTCTTGCCCGTAAGAGTCTTGACGAACACCTGCAT 3097 >seq974 Length=24368 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| || ||||||||| ||||| ||||| || | || |||| Sbjct 97 AGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCACTCAGAGTACGACCATCC 156 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || ||||| || || || ||||| | || | ||||||||||| Sbjct 157 TCGAGCTGCTTGCCTGCAAAGATAAGGCGCTGTTGGTCCGGGGGAATACCCTCCTTGTCT 216 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| |||||| | |||| || | |||||| || | || || ||| Sbjct 217 TGGATCTTTGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTC 276 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || || |||||||| || | ||||||| Sbjct 277 TTTCCTGTCAGAGTCTTTACGAAAACCTGCATG 309 >seq3174 Length=2799 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || |||| |||| || || ||||| ||||| || Sbjct 412 CTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCATCCTCGAGCTGCTTACCGGCAAA 353 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||| || || ||||| | || | ||||||||||| | || || ||||| | Sbjct 352 GATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--A 295 Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || || | || | |||||| || | ||| || ||||| |||||||||||||| Sbjct 294 TTCTCGATGGTGTCCGACGACTCGACCTCGAGGGTAATCGTCTTACCCGTGAGGGTCTTG 235 Query 34964 ACAAAGATCTGCATG 34978 || || | |||||| Sbjct 234 ACGAACACTTGCATG 220 >seq1001 Length=1754 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || |||| | || || || ||||| || || || Sbjct 308 CTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCTTCGAGCTGCTTGCCCGCAAA 367 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||| || || ||||| | || | ||||||||||| | | || |||||| Sbjct 368 GATCAGGCGCTGTTGGTCCGGGGGGATGCCCTCCTTGTCCTGGACCTTGGACTTGACGAC 427 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || | | |||||| || | || || ||||| |||||||| ||||| | Sbjct 428 GTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTTGCCCGTGAGCGTCTTGAT 487 Query 34966 AAAGATCTGCATG 34978 ||||| |||||| Sbjct 488 GAAGATTTGCATG 500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325679851879178