Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq3012 100 3e-16 seq877 95.1 1e-14 >seq3012 Length=3775 Score = 100 bits (110), Expect = 3e-16 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 50535 GACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAG 50594 ||||| | |||||| | || | |||||||| || | |||||||| ||||||||||| Sbjct 3378 GACGCGCTGCCCGTGTCGCTGATTGGCATGAATGCGCGCCTGATGTGCCAGTACATTGAG 3437 Query 50595 TTTGTTGCAGACAGATTGTTGTTGCAGCTGGGACAACCGAAATACTATAATGC-ACGTAA 50653 ||||| || ||| | || | || |||||| | ||||| |||| || || ||| || Sbjct 3438 TTTGTGGCGGACCGCCTGCTCGTGGCGCTGGGCAACCCGAAGCACTACAACGCGACG-AA 3496 Query 50654 CCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGA 50707 |||||| |||||| | || || ||| || ||||||| | ||||||||||| Sbjct 3497 CCCCTTCGACTTTATGGAGAATATTTCGCTGCAGGGCAAGTCGAACTTTTTCGA 3550 >seq877 Length=2157 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 |||||||| | ||| | ||||| || || || |||||||| ||||||| |||| | | Sbjct 1839 CGCAAAACGAGATGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCG 1898 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 || ||||| || || || ||| |||| || || ||||||||||| || ||||| || ||| Sbjct 1899 TCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGAATGCCCTCCTTG 1958 Query 137317 TC 137318 || Sbjct 1959 TC 1960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488524079618400