Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq2836 125 1e-23 seq79 107 4e-18 >seq2836 Length=5357 Score = 125 bits (138), Expect = 1e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || || || || | ||| || || || || ||||| || || || ||| Sbjct 3097 TACCACCACGCAGGCGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCAC 3156 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || || || || ||||| ||||| || | ||||| || |||| Sbjct 3157 TCAGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGTTGGTCCGGAG 3216 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || |||||||| || || ||||||||||||||||| | ||| | Sbjct 3217 GAATACCCTCCTTGTCCTGAATCTTGGCCTTCACATTTTCAATCGTATCGGACGATTCCA 3276 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||| || |||||||| || || | |||||| || || | |||||| Sbjct 3277 CTTCCAGCGTGATCGTCTTACCAGTGAGCGTCTTGACGAACACCTGCAT 3325 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 82581 CTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCA 82640 ||||| || | || ||| || || | ||| || || || || ||||| || || || || Sbjct 2412 CTACCACCACGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCG 2471 Query 82641 GATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGA 82700 || | | || || || || || || ||||||||||| || | ||||| || || Sbjct 2472 CTAAGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCCGGG 2531 Query 82701 GGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCT 82760 || || || ||||| || || ||||| || || || || || ||||| || || || Sbjct 2532 GGAATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATCGTGTCCGAAGACTCG 2591 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | || || |||||||| || | ||||| || || | |||||| Sbjct 2592 ACCTCGAGCGTGATAGTCTTGCCCGTAAGAGTCTTGACGAACACCTGCAT 2641 >seq79 Length=269 Score = 107 bits (118), Expect = 4e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733 |||||||| || | ||||| || ||||| || || ||||||||||||||||| || || Sbjct 1 GCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCTTGAATCTTCGCCTTC 60 Query 82734 ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTC 82793 || |||||||| || ||| | ||| |||||||| || ||||||||||| || | ||| Sbjct 61 ACGTTTTCAATGGTGTCAGACGATTCCACTTCCAATGTAATCGTCTTGCCCGTAAGGGTC 120 Query 82794 TTTACAAATATCTGCAT 82810 || || || | ||||| Sbjct 121 TTGACGAAGACTTGCAT 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981786165145818