Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2836 125 6e-24 seq1001 111 1e-19 seq3174 104 2e-17 seq881 82.4 7e-11 >seq2836 Length=5357 Score = 125 bits (138), Expect = 6e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || || || |||| ||||| |||||||| || || Sbjct 2678 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCTTCCAGTTGCTTACCGGCGAA 2737 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| || |||||||||| |||||| ||| | | Sbjct 2738 GATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 2797 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| ||||||||| |||| ||||||||| ||||| || | || || || Sbjct 2798 CTCGATAGTGTCGGACGATTCCACTTCCAGCGTGATCGTCTTACCAGTGAGTGTCTTGAC 2857 Query 35725 AAATATCTGCAT 35736 || | |||||| Sbjct 2858 GAACACCTGCAT 2869 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAG-GTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||| || |||||||| ||| | ||| || || | || || || ||||| || ||||| Sbjct 3363 TCCTTCTGGATGTTGTAGTCG-CTAAGCGTACGGCCATCCTCAAGTTGCTTGCCGGCAAA 3421 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| | |||||||||| |||||| ||||| | Sbjct 3422 GATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTT 3481 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | |||||| || || ||||| | |||||| || || ||||| | ||| || Sbjct 3482 CTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATAGTCTTGCCCGTAAGAGTCTT 3538 >seq1001 Length=1754 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| | || || |||| || |||||||| |||||||| Sbjct 308 CTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCTTCGAGCTGCTTGCCCGCAAA 367 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCA-GAG 35663 |||| ||||| ||||||| || | || |||||||||| || ||| ||| | || Sbjct 368 GATCAGGCGCTGTTGGTCCGGGGGGATGCCCTCCTTGTCCTGGACCTTGGACTTGACGAC 427 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | | |||||||||||| || ||||| | ||||||||| || ||||| | || || | Sbjct 428 GT-CGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTTGCCCGTGAGCGTCTTGA 486 Query 35724 CAAATATCTGCAT 35736 || || ||||| Sbjct 487 TGAAGATTTGCAT 499 >seq3174 Length=2799 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| | || || | || || ||||||||||| ||||| Sbjct 412 CTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCATCCTCGAGCTGCTTACCGGCAAA 353 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||| ||||||| ||||| || |||||||||| |||||| ||| | | | Sbjct 352 GATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 293 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| ||| || ||||| | || ||||| |||||||| | || || || Sbjct 292 CTCGATGGTGTCCGACGACTCGACCTCGAGGGTAATCGTCTTACCCGTGAGGGTCTTGAC 233 Query 35725 AAATATCTGCAT 35736 || | ||||| Sbjct 232 GAACACTTGCAT 221 >seq881 Length=2154 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || || ||| |||| || |||||||| || ||||| Sbjct 1855 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAA 1914 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 || | ||||||||||||| || | || |||||| ||| |||||| Sbjct 1915 GATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTATCCTGGATCTT 1962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450775218890960