Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq877 111 1e-19 seq881 105 6e-18 seq2836 89.7 4e-13 seq1001 84.2 2e-11 >seq877 Length=2157 Score = 111 bits (122), Expect = 1e-19 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| ||||| || | ||| | |||||| || || || || |||||||||||| Sbjct 1827 CCGCCGCGCAGGCGCAAAACGAGATGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTC 1886 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | ||||| |||| |||||||| || ||||| | ||||| ||||| ||||| ||||| Sbjct 1887 AGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGA 1946 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCA 27171 | ||||| || || ||||||| ||||| Sbjct 1947 ATGCCCTCCTTGTCCTGGATCTTGGCTTTCA 1977 >seq881 Length=2154 Score = 105 bits (116), Expect = 6e-18 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| |||| || | || | ||| || || || || || |||||||||||| Sbjct 1820 CCGCCGCGCAGGCGCAGGACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 1879 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | ||||| |||| |||||||| || ||||| | ||||||||||| || |||||||| Sbjct 1880 AGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGCGGG 1939 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCA 27171 | ||||| ||||| ||||||| ||||| Sbjct 1940 ATGCCCTCCTTATCCTGGATCTTGGCTTTCA 1970 >seq2836 Length=5357 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || || ||||||||||||| | || ||||||| || || ||||| Sbjct 2672 CGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCTTCCAGTTGCTTACC 2731 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 |||| | || || ||||| || ||||| || | ||||| || || ||||||| || Sbjct 2732 GGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 2791 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | | || | |||||| | | ||| ||||| || || || | || || || || || Sbjct 2792 GACGTTCTCGATAGTGTCGGACGATTCCACTTCCAGCGTGATCGTCTTACCAGTGAGTGT 2851 Query 27230 TTTCACAAAGATTTGCATA 27248 || || || | |||||| Sbjct 2852 CTTGACGAACACCTGCATA 2870 >seq1001 Length=1754 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || || ||||||||||| | |||| ||||||||||||| || || Sbjct 302 CGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCTTCGAGCTGCTTGCC 361 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 || | || || |||||||| ||||| || | ||||| || || || |||| || Sbjct 362 CGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATGCCCTCCTTGTCCTGGACCTTGGACTT 421 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | || | ||||| | | || || || || || || | |||||||| || || Sbjct 422 GACGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTTGCCCGTGAGCGT 481 Query 27230 TTTCACAAAGATTTGCATAGC 27250 || | ||||||||||| || Sbjct 482 CTTGATGAAGATTTGCATGGC 502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424917506467344