Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq2790 82.4 6e-11 >seq2790 Length=6142 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29836 TGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAG 29895 |||||| |||| | ||||| | | ||||| || |||||| || | | || || Sbjct 1890 TGTGGGGAAGGCCCGAGGCTCGCGCATCAGCTGCTGCTGCAGCGGCTCGATATGGTCGAG 1831 Query 29896 GTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 29955 ||| ||||||||||| |||| | | || || ||| || || |||||||| Sbjct 1830 GTACACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGCCGCCTCACATCCCGTGACGTG 1771 Query 29956 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCAT 30015 || || | || ||||| || | |||||| || ||||| ||||| || || | |||| Sbjct 1770 CGCGATGAGGTGGGTGAGTAGCGCGTAGCTCGCAATGTTGAAGGGCACGCCCAATCCCAG 1711 Query 30016 GTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT 30050 || | ||| | |||||| | ||| |||||||||| Sbjct 1710 ATCGCACGAGCGCTGGTACATCTGGCACGAGAGCT 1676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406294246876104