Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq2836 118 9e-22 seq974 105 6e-18 >seq2836 Length=5357 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||| | || || || || || || || ||| | || || || ||||||||| ||||| Sbjct 2869 ATGCAGGTGTTCGTCAAGACACTCACTGGTAAGACGATCACGCTGGAAGTGGAATCGTCC 2810 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || || || ||||| || ||||| || || || || Sbjct 2809 GACACTATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 2750 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || ||| |||||||| || || | ||| |||||| Sbjct 2749 CAGCGCCTGATCTTCGCCGGTAAGCAACTGGAAGACGGTCGTACTCTGAGCGACTACAAC 2690 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | || | ||| |||| ||||| || Sbjct 2689 ATCCAGAAGGAGTCGACGCTTCACCTCGTCCTTCGTCTGCGTGGTGGTAT 2640 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||| | || || || ||||| || |||||| |||| || || || || || | || Sbjct 2641 ATGCAGGTGTTCGTCAAGACTCTTACGGGCAAGACTATCACGCTCGAGGTCGAGTCTTCG 2582 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| ||||| || || || ||||| || ||||| || || || ||| Sbjct 2581 GACACGATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAA 2522 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || ||||| || | || || | || || ||| |||||| Sbjct 2521 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTTAGCGACTACAAC 2462 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | || | || | ||| |||| ||||| Sbjct 2461 ATCCAGAAGGAGTCGACGCTTCACCTCGTCCTCCGTCTGCGTGGTGG 2415 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||| | || || || || || || || ||| | || || || ||||||||| ||||| Sbjct 3325 ATGCAGGTGTTCGTCAAGACGCTCACTGGTAAGACGATCACGCTGGAAGTGGAATCGTCC 3266 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || ||||||| | || || || ||||| ||||| || || || || || || ||| Sbjct 3265 GATACGATTGAAAATGTGAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAA 3206 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || | || || | || | || |||||| Sbjct 3205 CAGCGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTGAGTGACTACAAC 3146 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | || | || |||| ||||| || Sbjct 3145 ATCCAGAAGGAGTCGACGCTTCACCTCGTCCTCCGCCTGCGTGGTGGTAT 3096 >seq974 Length=24368 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||| | || ||||| |||||||| || ||| | || || || ||||| || |||| Sbjct 309 CATGCAGGTTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGTCGAGTCGTC 250 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| |||| |||| ||||| ||| || |||||||| || || || || || || || Sbjct 249 CGACACGATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGTATTCCCCCGGACCA 190 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | || ||||| || | || || || || | || ||||| Sbjct 189 ACAGCGCCTTATCTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGAGTGACTACAA 130 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||| || ||||||||||| Sbjct 129 CATCCAGAAGGAGTCGAC 112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434900666202240