Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1001 104 2e-17 >seq1001 Length=1754 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || ||||| ||| || || || || || ||| || || || |||| || ||||| Sbjct 297 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCTTCGAGCTGC 356 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||||||||| || || ||||| ||||| | ||| | || ||| |||||| || || Sbjct 357 TTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATGCCCTCCTTGTCCTGGACCTTG 416 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| || || | | ||| ||||||||||| || || | |||||| | || ||||| Sbjct 417 GACTTGA-CGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTTGCCCGT 475 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || | ||||||||||| Sbjct 476 GAGCGTCTTGATGAAGATTTGCAT 499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429528523146206