Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq2836 152 1e-31 seq974 152 1e-31 seq3174 134 3e-26 seq1001 125 2e-23 seq3230 113 1e-19 seq79 107 5e-18 seq877 86.0 1e-11 >seq2836 Length=5357 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || || || |||| ||||| || || || | ||||| Sbjct 3114 AGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCACTCAGCGTGCGGCCATCC 3173 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||||||||| || |||||||| || |||||||| |||||||| Sbjct 3174 TCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 3233 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| ||| || || || || | |||||| || | |||||||||| Sbjct 3234 TGAATCTTGGCCTTCACATTTTCAATCGTATCGGACGATTCCACTTCCAGCGTGATCGTC 3293 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | || || | |||||| ||||| Sbjct 3294 TTACCAGTGAGCGTCTTGACGAACACCTGCAT 3325 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || || || |||| ||||| ||| | || | ||||| Sbjct 2430 AGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTAAGCGTGCGGCCATCC 2489 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || |||||||| || ||||| || |||||||| Sbjct 2490 TCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCC 2549 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||| ||||| || | || || || | |||||| ||| Sbjct 2550 TGGATCTTCGCCTTGACGTTCTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATAGTC 2609 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| | ||| || | |||||| ||||| Sbjct 2610 TTGCCCGTAAGAGTCTTGACGAACACCTGCAT 2641 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || || || |||| ||||| ||| || ||| | || ||| Sbjct 2658 AGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCT 2717 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || |||||||| || || || ||||| || ||||| || |||||||| Sbjct 2718 TCCAGTTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 2777 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||| ||||| || | |||||| || | |||||||||| Sbjct 2778 TGGATCTTGGCCTTGACGTTCTCGATAGTGTCGGACGATTCCACTTCCAGCGTGATCGTC 2837 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | || || | |||||| ||||| Sbjct 2838 TTACCAGTGAGTGTCTTGACGAACACCTGCAT 2869 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || ||||| || |||| ||||| ||| | || | ||||| Sbjct 2886 AGAACGAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTAAGCGTGCGGCCATCC 2945 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || |||||||| || |||||||| |||||||| Sbjct 2946 TCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGAATACCCTCCTTGTCC 3005 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| ||||| ||||| || | || || || | |||||| ||| Sbjct 3006 TGAATCTTAGCCTTAACATTCTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATAGTC 3065 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| | ||| || | |||||| ||||| Sbjct 3066 TTGCCCGTAAGAGTCTTGACGAACACCTGCAT 3097 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || ||||| || |||| ||||| ||| | || | ||||| Sbjct 3342 AGAACGAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTAAGCGTACGGCCATCC 3401 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || || ||||| || || || ||||| || |||||||| |||||||| Sbjct 3402 TCAAGTTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 3461 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||| ||||| |||| || || || | |||||| ||| Sbjct 3462 TGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATAGTC 3521 Query 225682 TTGCCCGTCAAAGTTTT 225698 |||||||| | ||| || Sbjct 3522 TTGCCCGTAAGAGTCTT 3538 >seq974 Length=24368 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || || || |||| ||||| || || ||| | ||||| Sbjct 97 AGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCACTCAGAGTACGACCATCC 156 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || |||||||| || |||||||| || |||||||| ||||||||| Sbjct 157 TCGAGCTGCTTGCCTGCAAAGATAAGGCGCTGTTGGTCCGGGGGAATACCCTCCTTGTCT 216 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| || ||||| ||||| || | || || || | ||||||||| Sbjct 217 TGGATCTTTGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTC 276 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||| ||| |||| ||| || ||||| Sbjct 277 TTTCCTGTCAGAGTCTTTACGAAAACCTGCAT 308 >seq3174 Length=2799 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| || || || || || |||| ||||| ||| | || | ||||| Sbjct 432 AGCACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCATCC 373 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || |||||||| || ||||| || |||||||| Sbjct 372 TCGAGCTGCTTACCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 313 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| || | || || || | || |||||| Sbjct 312 TGGATCTTGGCCTTGACATTCTCGATGGTGTCCGACGACTCGACCTCGAGGGTAATCGTC 253 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| | || || | |||||||||||| Sbjct 252 TTACCCGTGAGGGTCTTGACGAACACTTGCAT 221 >seq1001 Length=1754 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| || || || || |||| ||||| ||| | || | || ||| Sbjct 288 AGCACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCT 347 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || |||||||| || || || || |||||||| Sbjct 348 TCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATGCCCTCCTTGTCC 407 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||| ||| ||| || | ||||| ||||| | || || || | |||||||||| Sbjct 408 TGGACCTTGGACTTGACGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTC 467 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| | || || ||||| | |||||| Sbjct 468 TTGCCCGTGAGCGTCTTGATGAAGATTTGCAT 499 >seq3230 Length=26649 Score = 113 bits (124), Expect = 1e-19 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| || || || || || |||| ||||| ||| | || | ||||| Sbjct 2382 AGCACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTACGGCCATCC 2441 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || |||||||| || ||||| || |||||||| Sbjct 2442 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 2501 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGA 225656 |||||||| ||||||| ||||||||||| || Sbjct 2502 TGGATCTTGGCCTTCACATTCTCGATGGTGTCCGA 2536 >seq79 Length=269 Score = 107 bits (118), Expect = 5e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 || ||||| || || |||||||| || ||||| || ||||| ||||| ||||| |||| Sbjct 1 GCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCTTGAATCTTCGCCTTC 60 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 || ||| |||||||| || | |||||| || || || |||||||||||||| | || Sbjct 61 ACGTTTTCAATGGTGTCAGACGATTCCACTTCCAATGTAATCGTCTTGCCCGTAAGGGTC 120 Query 225697 TTTATGAACACTTGCAT 225713 || | ||| |||||||| Sbjct 121 TTGACGAAGACTTGCAT 137 >seq877 Length=2157 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564 || || || || || || || || |||| ||||| ||| || || | ||| || || Sbjct 1845 ACGAGATGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCGTCCTCG 1904 Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624 |||||||| || || ||||| || || || || ||||||||||| || |||||||| ||| Sbjct 1905 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGAATGCCCTCCTTGTCCTGG 1964 Query 225625 ATCTT 225629 ||||| Sbjct 1965 ATCTT 1969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192481358903828