Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq2790 91.5 1e-13 seq2782 82.4 6e-11 >seq2790 Length=6142 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27102 TGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAG 27161 |||||| |||| | ||||| | | ||||| || |||||| || | || || || Sbjct 1890 TGTGGGGAAGGCCCGAGGCTCGCGCATCAGCTGCTGCTGCAGCGGCTCGATATGGTCGAG 1831 Query 27162 GTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 27221 ||| ||||||||||| |||| || | || || ||| || || |||||||| Sbjct 1830 GTACACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGCCGCCTCACATCCCGTGACGTG 1771 Query 27222 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCAT 27281 || || | || ||||| || | |||||| || ||||| ||||| || || | |||| Sbjct 1770 CGCGATGAGGTGGGTGAGTAGCGCGTAGCTCGCAATGTTGAAGGGCACGCCCAATCCCAG 1711 Query 27282 GTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT 27316 || | ||| | |||||| | ||| |||||||||| Sbjct 1710 ATCGCACGAGCGCTGGTACATCTGGCACGAGAGCT 1676 >seq2782 Length=6199 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/232 (68%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 27086 TCCTGTTTA-TCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGC 27144 ||| ||||| || | | |||||| ||||||| ||||| | | ||||| || || | Sbjct 1995 TCCCGTTTAATCTTAATTGTGGGGAAGGGTCGCGGCTCGCGCATCAGCTGCTGCTGCAAC 1936 Query 27145 GGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGT 27204 || || | || | ||||| ||||||||||| |||| || | || || ||| | Sbjct 1935 GGCTCAATATGGTTGAGGTATACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGCCGCT 1876 Query 27205 TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAG 27264 || || || || || || || | || ||||| || | || || || ||||| ||| Sbjct 1875 TCGCATCCCGTCACATGTGCGATGAGGTGGGTGAGTAGCGCATAACTTGCAATGTTGAAG 1816 Query 27265 GGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT 27316 || || || | ||||| || | ||| | |||||| | ||| || ||||||| Sbjct 1815 GGCACGCCCAACCCCAGATCGCACGAGCGCTGGTACATCTGGCATGAGAGCT 1764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369492510010322