Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2983 205 1e-47 seq2982 187 3e-42 >seq2983 Length=6149 Score = 205 bits (226), Expect = 1e-47 Identities = 440/658 (67%), Gaps = 45/658 (7%) Strand=Plus/Minus Query 145646 TGGGAAAGGGCCGGGGGCTCCTGG-TCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGG 145704 |||| ||||| || || ||| | ||||||| ||| || ||||| | ||||||||| Sbjct 1917 TGGGGAAGGGTCGCGG-CTCGCGCATCAGCTGCTGCTGCAACGGCTCAATATGGTTGAGG 1859 Query 145705 TAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGG 145764 || ||||| ||||| |||| | | | |||| || | | ||| ||||| | || Sbjct 1858 TATACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGCCGCTTCGCATCCCGTCACATGT 1799 Query 145765 GCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATG 145824 |||| | || ||| || || | || || || |||||||||||||| |||| ||||| Sbjct 1798 GCGATGAGGTGGGTGAGTAGCGCATAACTTGCAATGTTGAAGGGCACGCCCAACCCCAGA 1739 Query 145825 TCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCC----------------CCGCC--- 145865 || | |||||||||||||| |||||| ||||||| | ||||| Sbjct 1738 TCGCACGAGCGCTGGTACATCTGGCATGAGAGCTGCGGCTTGCGTCCCACCGCCGCCTCT 1679 Query 145866 --------CGCCACGT------AGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911 || || | |||| ||||||| || || ||||| |||| |||||| Sbjct 1678 TCAGGGTTCGGCAGGGTGACAAAGAATTGGCACAAGATATGACAGGGTGGCAATGCCATG 1619 Query 145912 GCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTC---GGGGTTC 145968 || ||||| | ||||||||| |||| ||| || | | | || || ||||||| Sbjct 1618 AGCGGTAGGTCAGGCGGGTTCCATGCGGAGAGCACAA---TGCGGCGGTCAGTGGGGTTC 1562 Query 145969 CTCTTGATCTCCCCTATCAG--GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTG 146026 ||||||| | || | || || |||||||| || ||||||||| || || | Sbjct 1561 GTCTTGATTTGATGAATGACCTGTGCC--AGCTGGTCTACACCCTGCCCCGTATAGTCGG 1504 Query 146027 TCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCA 146086 | | || ||| |||||| ||| || ||||||| ||| ||||| ||||| || || |||| Sbjct 1503 TGTCGGCGTCGACGTACTGGGCGCCAAAGTGCCGCCATTGGAAGCCGTACACCGGTCCCA 1444 Query 146087 GGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGG 146146 ||| || || | ||| || || ||| | |||||||| || ||| || ||| Sbjct 1443 AGTCGCCCGGACGACGGTGTCCGAGTCCGCGACTCGCGAGGAATTCGGCGGAGCCATTGC 1384 Query 146147 CGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGA 146206 | |||||||| | ||| | | | | ||| |||| |||||| ||| || | Sbjct 1383 CATCCCAGATGTGCACGTTGCGCTCCGCCAGCCAGTTGGCATCCGTGTTGCCCGAAATAA 1324 Query 146207 ACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 ||||||| ||||||||||| || || | |||| || | |||||||| ||||| || Sbjct 1323 ACCAGAGAAGCTCTTCGAGTACGCCACGGAAGAAAACGCGTTTGGTGGTGAGCAGCGG 1266 >seq2982 Length=6182 Score = 187 bits (206), Expect = 3e-42 Identities = 431/653 (66%), Gaps = 35/653 (5%) Strand=Plus/Minus Query 145646 TGGGAAAGGGCCGGGGGCTCCTGG-TCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGG 145704 |||| |||| ||| || ||| | ||||||| ||| ||| ||||| | |||| |||| Sbjct 1917 TGGGGAAGGCCCGAGG-CTCGCGCATCAGCTGCTGCTGCAGCGGCTCGATATGGTCGAGG 1859 Query 145705 TAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGG 145764 || ||||| ||||| |||| | | | |||| || | | ||| ||||||| ||| Sbjct 1858 TACACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGCCGCCTCACATCCCGTGACGTGC 1799 Query 145765 GCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATG 145824 || | | || ||| || || | |||||| || |||||||||||||| |||| |||| Sbjct 1798 GCAATGAGGTGGGTGAGTAGCGCGTAGCTCGCAATGTTGAAGGGCACGCCCAAGCCCAGA 1739 Query 145825 TCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCT----------CCCCGC--CCGCC--- 145869 || | |||||||||||||| |||||| ||||||| ||| || ||||| Sbjct 1738 TCGCACGAGCGCTGGTACATCTGGCACGAGAGCTGCGGCTTGCGCCCTGCCGCCGCCTCC 1679 Query 145870 ------------------ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911 ||| |||| ||||| || | ||| |||||||||| ||||||| Sbjct 1678 TCAAGGGTCGGCGGGGTAACGAAGAATTGGCAAAGAATGTGACAGGGCGGCAAGGCCATG 1619 Query 145912 GCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTC 145971 |||| ||| | |||||||| || | ||| | | | | | | ||| ||| || Sbjct 1618 AGTGGCATGTCAGGTGGGTTCCATGCAGAGAGCAGAATGCGGCGGTCCGTGGGATTCGTC 1559 Query 145972 TTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTG 146031 ||||| | || | | | |||||||| || ||||| ||| ||| || || | | Sbjct 1558 TTGATTTGATGAATGACCTGCGCCAGCTGGTCGACACCCTGTCCCGTGTAGTCAGTGTCG 1499 Query 146032 GAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCC 146091 | || ||||| ||| |||||||||| ||| ||||| || || || || |||| ||| Sbjct 1498 GCATCAACGTATTTGGCGCCGAAGTGCCGCCATTGGAAACCATATACCGGACCCAAGTCG 1439 Query 146092 CCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCC 146151 || || | ||| || |||||| | |||||||| || || || || | ||| Sbjct 1438 CCCGGACGGCGGTGTCCGAGCCCGCGGCTCGCGAGGAATTCAGCAGAGCCATTACCATCC 1379 Query 146152 CAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAG 146211 ||||| | ||| | | | | ||| || | |||||| || || ||||| Sbjct 1378 CAGATGTGCACGTTGCGCTCCGCCAGCCAGTTAGCATCCGTGTTGCCTGAAATAAACCAC 1319 Query 146212 AGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 || ||||||||||| || || | | || || | |||||||| ||||| || Sbjct 1318 AGAAGCTCTTCGAGCACGCCGCGGAAAAATACGCGTTTGGTGGTGAGCAGTGG 1266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590051330810120