Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq3426 118 9e-22 seq1131 118 9e-22 seq2003 116 3e-21 seq1082 116 3e-21 seq3352 105 6e-18 seq3237 105 6e-18 seq990 100 2e-16 seq3061 95.1 1e-14 seq1959 89.7 4e-13 >seq3426 Length=2638 Score = 118 bits (130), Expect = 9e-22 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| ||||| | | ||| || | ||| | |||||||| || || |||||||| ||||| Sbjct 342 ACCGCCGCGCAGGCGCAAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCT 283 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || |||||| ||||||||||| || || || ||||||| |||||||||||||| || Sbjct 282 CAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGG 223 Query 118631 TATGCCCTCCTTGTC 118645 |||||||||||||| Sbjct 222 AATGCCCTCCTTGTC 208 >seq1131 Length=1851 Score = 118 bits (130), Expect = 9e-22 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| ||||||| || || |||||| ||||| || ||||| | Sbjct 1851 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTGCTTGCCAGCAAA 1792 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| || |||||||| || || || || ||||||||||| || || || || | Sbjct 1791 GATAAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 1732 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||||| | ||||||||||| || | ||| || || ||||| || || || Sbjct 1731 CTCGATCGTGTCCGAGGACTCGACCTCGAGCGTAATCGTCTTTCCTGTCAGGGTCTTAAC 1672 Query 118727 AAAAATCTGCATG 118739 |||| ||||||| Sbjct 1671 GAAAACCTGCATG 1659 >seq2003 Length=103857 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | || ||||| || ||||||||||| || || | ||||| |||||| Sbjct 24525 ACCAAATGAAGCGTCGACTCCTTCTGAATGTTGTAGTCACTGAGCGTGCGGCCATCCTCA 24466 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| |||| |||||||| || || ||||| |||||||||||||| | Sbjct 24465 AGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 24406 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||||||| | ||| || |||| || | || ||| Sbjct 24405 ATCTTCGCCTTGACGTTCTCGATCGTGTCCGAGGACTCAACTTCGAGCGTGATAGTCTTG 24346 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| || || || | ||||| Sbjct 24345 CCCGTAAGAGTCTTGACGAAGACTTGCAT 24317 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 118606 AGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCT 118665 |||| |||||||| || || ||||| ||||||||||||||| || ||| || || | Sbjct 24175 AGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTTGCCTTGACGT 24116 Query 118666 GTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 118725 |||| ||||| | |||||| |||| || | ||| || || |||||||| |||| Sbjct 24115 TCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTTCCTGTCAGAGTCTTTA 24056 Query 118726 CAAAAATCTGCATG 118739 | |||| ||||||| Sbjct 24055 CGAAAACCTGCATG 24042 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||||||| || || |||||||||||| || || Sbjct 24285 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCGAGCTGCTTGCCC 24226 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC 118640 || |||| |||||||| || || ||||| ||||||||| Sbjct 24225 GCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCC 24187 >seq1082 Length=24331 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| ||||| | || || |||||| Sbjct 24328 CACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTACGGCCATCCTC 24269 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||| || ||||| || || ||||| |||||||||||||| Sbjct 24268 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 24209 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||||| ||||||||||| ||| | ||| || Sbjct 24208 GATCTTGGCCTTCACATTCTCGATGGTGTCCGACGACTCGACCTCGAGGGTAATCGTCTT 24149 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 || || || || || || || | ||||||| Sbjct 24148 ACCCGTGAGGGTCTTGACGAACACTTGCATGG 24117 >seq3352 Length=3025 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||||| || ||||| || || |||||||| ||||| | ||||| ||||| Sbjct 2499 CACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTC 2440 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || || ||||||| |||||||| || || || || ||||||||||| Sbjct 2439 GAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 2380 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 | || || || |||| ||||| | ||||||||||| || | ||| || Sbjct 2379 GACCTTGGACTTGACGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTT 2320 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 118741 ||| || || || || | || || |||||||| Sbjct 2319 GCCCGTGAGCGTCTTGATGAAGATTTGCATGGC 2287 >seq3237 Length=3769 Score = 105 bits (116), Expect = 6e-18 Identities = 244/365 (67%), Gaps = 17/365 (5%) Strand=Plus/Plus Query 44940 TGATGCCCGGACTGACGTTTAGCAACGAATTGATTTCGAGAGACGAAGGTCTGCACACCA 44999 |||||||||| ||| |||| ||||| | || ||| | ||||| |||||||||||| Sbjct 3206 TGATGCCCGGCCTGTCGTTCTCGAACGAGCTCATCTCGCGTGACGAGGGTCTGCACACCG 3265 Query 45000 ACTTTGCCTGCCTCTACTATAATACGAGAGTCGATCAAAAGTTGGACGCGCCC----ACC 45055 ||||||| ||||| || | | | |||| | | ||| ||| || Sbjct 3266 ACTTTGCGTGCCTG--CTGTTTGGCCACC-----TCAAGAAGCGCGCGCACCCCGACACG 3318 Query 45056 GTCAACGACATGTTCTCCGAAGCCGTGGCCATCGAGATGGAATTTTTTGCTGAGGCTCTG 45115 || ||| ||| | |||| || ||||| || ||| || || || | || || ||| Sbjct 3319 GTGAACCGCATCATTACCGAGGCGGTGGCGATTGAGCAAGACTTCCTTTCCGACGCGCTG 3378 Query 45116 CCCGAATCGTTGGTGGGAATGAACGCGAATATGATGAGAAAGTACATTGAGTTTGTCGCC 45175 |||| ||| || | || ||||| ||| ||||| | |||||||||||||||| || Sbjct 3379 CCCGTGTCGCTGATTGGCATGAATGCGCGCCTGATGTGCCAGTACATTGAGTTTGTGGCG 3438 Query 45176 GATCGTCTTCTCGTCCAGTTAAAGTATCCCAAGATGTACTATACTGAGAACCCATTCGAG 45235 || || || ||||| | | | || ||| ||| | | |||||| ||||| Sbjct 3439 GACCGCCTGCTCGTGGCGCTGGGCAACCCGAAGCACTACAACGCGACGAACCCCTTCGAC 3498 Query 45236 TTTATGAACAATATTTCGTTGGAGGGCAAAACTAAtttttttGAGAAACGC---GTCGGC 45292 |||||| | ||||||||| || ||||||| | || ||||| ||| ||| |||||| Sbjct 3499 TTTATGGAGAATATTTCGCTGCAGGGCAAGTCGAACTTTTTCGAG---CGCAAGGTCGGC 3555 Query 45293 GAATA 45297 || || Sbjct 3556 GACTA 3560 >seq990 Length=2172 Score = 100 bits (110), Expect = 2e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| ||||| | | || || | ||| | || ||||| || || |||||||| ||||| Sbjct 346 ACCGCCGCGCAGGCGCAGGACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 287 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || |||||| ||||||||||| || || || |||||||||||||||| || || || Sbjct 286 CAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGCGG 227 Query 118631 TATGCCCTCCTTGTC 118645 ||||||||||| || Sbjct 226 GATGCCCTCCTTATC 212 >seq3061 Length=5265 Score = 95.1 bits (104), Expect = 1e-14 Identities = 179/260 (69%), Gaps = 9/260 (3%) Strand=Plus/Minus Query 134366 CAATCCCAGCCCGCCGCCCAGATTCGAAATCAACGCGGACTCGTGTAGAGTCTTGTAAAT 134425 |||| || |||||||| | || || |||| ||| || | || || | ||| || Sbjct 1262 CAATGCC-GCCCGCCGTC----TTGGAGATCATCGCACACGACTTGAGCGTGTCGTAGAT 1208 Query 134426 GCCATCGACGCTGTCGTCCTTGATGCTTTGCAGGAAACACGAACACATTTGTTGACGACG 134485 ||| |||| ||||||||| |||| |||||| ||||| |||| || | | | Sbjct 1207 GCCCTCGATCGAGTCGTCCTTCATGCACACCAGGAAGCACGACGACATCTGCGGGCTCGG 1148 Query 134486 CGTACCCGCCGAAAACAGAGTCGGGCTCGCGTGCGTAAAGG--TGCCCAGACTCATCAAC 134543 ||| ||||| || || ||||| ||||||||||||| | | | ||| |||| Sbjct 1147 CGTGCCCGCGTTGAAGAGCGTCGGCGAGGCGTGCGTAAAGGCCTTCTCCGAC--ATCATG 1090 Query 134544 TGATATGTTTCAATGACGCTCTTAACGTCGTCGCCGTGAATGGCCAGAGCGACGCGCATG 134603 | || || || || |||||| |||||| |||||| ||| ||| || || |||||| Sbjct 1089 TTGTACGTCTCGATCGCGCTCTCGACGTCGGTGCCGTGGATGCCCACCGCCACACGCATG 1030 Query 134604 AGCATGTGTTGGGGTCTCTC 134623 |||||||| ||||| | ||| Sbjct 1029 AGCATGTGCTGGGGGCGCTC 1010 >seq1959 Length=18094 Score = 89.7 bits (98), Expect = 4e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| ||||||| || || |||||| ||||| || ||| Sbjct 138 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTGCTTACCA 79 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || |||| || ||||| || || || || |||||||||||||| Sbjct 78 GCAAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTC 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433812142925476