Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq3352 120 3e-22 seq1131 86.0 7e-12 >seq3352 Length=3025 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || |||| || |||||||| || || || Sbjct 2481 CTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCAAA 2422 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| || || |||| || Sbjct 2421 GATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGACCTTGGACTTGA-CGA 2363 Query 43112 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 || | | |||||||||||| || || |||| |||||| || |||||||| |||||||| | Sbjct 2362 CGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTTGCCCGTGAGCGTCTTGA 2303 Query 43171 CAAAGATTTGCAT 43183 ||||||||||| Sbjct 2302 TGAAGATTTGCAT 2290 >seq1131 Length=1851 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| || ||| || || | || || |||||||| ||||| || Sbjct 1851 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTGCTTGCCAGCAAA 1792 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | | |||||||||| ||| || |||| | Sbjct 1791 GATAAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 1732 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| || || || |||| ||| || || || || || || ||||| || Sbjct 1731 CTCGATCGTGTCCGAGGACTCGACCTCGAGCGTAATCGTCTTTCCTGTCAGGGTCTTAAC 1672 Query 43172 AAAGATTTGCAT 43183 || | ||||| Sbjct 1671 GAAAACCTGCAT 1660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571792918922840