Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3061 156 9e-33 seq1089 113 1e-19 seq1443 98.7 2e-15 seq2759 86.0 1e-11 >seq3061 Length=5265 Score = 156 bits (172), Expect = 9e-33 Identities = 439/669 (66%), Gaps = 15/669 (2%) Strand=Plus/Plus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892 ||||| ||||| ||| ||||| || || || | |||||| | | || || Sbjct 959 TTCAAGACGCTTGAGCGCTCGTACCTGCTGCGCATCAACGGCAAGGTGGCCGAGCGCCCC 1018 Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952 ||||||||| | ||||| ||||| || || || ||| ||| | ||||||| | || Sbjct 1019 CAGCACATGCTCATGCGTGTGGCGGTGGGCATCCACGGCACCGACGTCGAGAGCGCGATC 1078 Query 248953 GAGACGTACACCGGAATGA--GTGAACGCTGGATGACACATGCCACACCGACGCTCTTCA 249010 |||||||||| | ||| | ||| || | || || ||| | ||||||||||||| Sbjct 1079 GAGACGTACAACATGATGTCGGAGAAGGCCT--TTACGCACGCCTCGCCGACGCTCTTCA 1136 Query 249011 ACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACT 249070 |||| || || | | ||| || |||||||| || | |||| | ||||||| Sbjct 1137 ACGCGGGCACGCCGAGCCCGCAGATGTCGTCGTGCTTCCTGGTGTGCATGAAGGACGACT 1196 Query 249071 CTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAATTCGCGGGCG 249130 | |||| ||||| || |||||||| || | |||| ||| || || ||||||| Sbjct 1197 CGATCGAGGGCATCTACGACACGCTCAAGTCGTGTGCGATGATCTCCAAGACGGCGGGCG 1256 Query 249131 GAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATG 249190 | || |||||| | || | |||||| | | ||| |||||||| || || || | Sbjct 1257 GCATTGGTCTCAACATCCACTGCATCCGCGGCACGGGCTCGTACATTGCCGGCACGAACG 1316 Query 249191 GGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCA 249250 | || || | || || || ||| | || || | | ||| || | | | || Sbjct 1317 GTGTGAGCAACGGCATTGTGCCCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTCG 1376 Query 249251 ACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACG 249304 |||||| || ||||| || | || ||||| || | || ||||||| Sbjct 1377 ACCAGGGTGGCAACAAGCGCC---CCGGCGCCTTTGCCATCTACCTCGAGCCGTGGCACT 1433 Query 249305 CCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGC 249364 | || | || ||||| | ||| || |||||| ||||||| || || | |||| Sbjct 1434 CGGACGTGTTTGAGTTTATCGACCTGCGCAAGAACCACGGCAAGGAAGAGGTGCGCGCGC 1493 Query 249365 GTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACG 249424 | ||||| ||||||| |||||||| | ||| |||| |||||||| ||| || | || Sbjct 1494 GCGACCTGTTCTACGCGCTGTGGGTGCCGGACCTGTTTATGCGCCGTGTCGAGCAGGGCG 1553 Query 249425 GCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCATCGATCTAC-ACGGCGCC 249483 |||| |||||||| | | || |||| || || | |||| ||| || | |||||| Sbjct 1554 GCGACTGGACGCTGATGTGCCCCGCCGAGGCGCCCGGCCTCGCCGA-CTGCTACGGCGAG 1612 Query 249484 GACTTCGAC 249492 || || ||| Sbjct 1613 GAGTTTGAC 1621 >seq1089 Length=1968 Score = 113 bits (124), Expect = 1e-19 Identities = 189/266 (71%), Gaps = 8/266 (3%) Strand=Plus/Minus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || ||||| || ||||||||||| || ||| ||||||| || || Sbjct 1739 TGCTGTTCTACGGCCCGCCCGGCACGGGCAAGACGTCGACGATCATGGCGCTCGCGCGCC 1680 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 |||| ||| || | || || | | |||||||||||||||||| || ||||| | Sbjct 1679 GGCTGTACGGCAAGCAGTTCAAGA---ACCACGTGCTCGAGCTGAACGCGTCCGACGACC 1623 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCGATTTCGTCGT 254190 |||| | |||||||| |||| |||||||| | ||| | | | | || ||| || Sbjct 1622 GCGGCATCGACGTCGTGCGCGGGCAGATCAAGTCGTTCGCGAGCACG-CG-CAACGT-GT 1566 Query 254191 TC-CAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACG 254249 || || | || | | | |||||||| | | || |||||||| ||| |||||||| Sbjct 1565 TCAGCACGCAGCAGGAC-ACGTTCAAGCTGATCGTGCTCGACGAGGCCGACGCCATGACG 1507 Query 254250 GCCGACGCGCAGTCCGCCCTCCGCCG 254275 | ||||||| |||| ||||| || Sbjct 1506 CAGGCCGCGCAGGCCGCGCTCCGGCG 1481 >seq1443 Length=1308 Score = 98.7 bits (108), Expect = 2e-15 Identities = 233/341 (68%), Gaps = 12/341 (4%) Strand=Plus/Plus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || || || || ||||||||||| || ||| ||||||| || || Sbjct 223 TGCTCTTCTACGGCCCGCCGGGCACGGGCAAGACGTCGACGATCATGGCGCTCGCGCGCC 282 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 |||| || || | || || | | |||||| ||||||||||| || ||||| | Sbjct 283 GGCTGTACGGGAAGCAGTTCAAGA---ACCACGTGCTGGAGCTGAACGCGTCCGACGACC 339 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCGATTTCGTCGT 254190 |||| | |||||||| |||| |||||||| | ||| | | | | || ||| || Sbjct 340 GCGGCATCGACGTCGTGCGCGGGCAGATCAAGTCGTTCGCGAGCACG-CG-CAACGT-GT 396 Query 254191 TC-CAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACG 254249 || || | || | | | |||||||| | | || |||||||||||| |||||||| Sbjct 397 TCAGCACACAGCAGGAC-ACGTTCAAGCTGATCGTGCTCGACGAGGCGGACGCCATGACG 455 Query 254250 GCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGAC--GCGTT 254307 | |||||| | || ||||| || ||| ||| | || || | || ||| | Sbjct 456 CAGGCGGCGCAGGCGGCGCTCCGGCGCGTGATCGAGCAGTAC-ACGAAG-AACGTGCGCT 513 Query 254308 TTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCG 254348 | ||| | | ||||||||||| ||||||||| || || Sbjct 514 TCTGCATCATCTGCAACTACGTCAACAAGATCATCCCCGCG 554 >seq2759 Length=11413 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 115402 ATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGTTGCAGACTATGATG 115461 |||||||| | |||||||||||||| ||||| ||| |||| | |||||| | | | | Sbjct 8831 ATCGCACAGCGACTCTGAATCGGTTCAATGATCTTGTTGGACTGGTTGCACGCGAAGCAG 8772 Query 115462 AACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCTGGAAAGCACCAGGT 115521 || ||||||||| | | |||| ||||| | || || |||||||| ||||| ||| Sbjct 8771 AAGCGCGTCGTGTTGGCATAAATCTCCATCGTACGGCGTAGCGCCTGCTGCGCACCGGGT 8712 Query 115522 GTCAT 115526 ||||| Sbjct 8711 GTCAT 8707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073718894896704