Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1082 123 2e-23 seq2003 111 1e-19 seq3352 109 4e-19 seq1131 91.5 1e-13 seq3426 86.0 5e-12 seq1959 82.4 6e-11 >seq1082 Length=24331 Score = 123 bits (136), Expect = 2e-23 Identities = 152/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||||||||| ||||||||| |||||||||||| | || || | || || || || Sbjct 24322 GTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTACGGCCATCCTCGAGCTG 24263 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| ||||||||||| ||||| | |||||||||||| || || Sbjct 24262 CTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 24203 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | | ||||| ||| ||||| | |||||||||||| ||||| Sbjct 24202 GGCCTTCACATTCTCGATGGTGTCCGACGACTCGACCTCGAGGGTAATCGTCTTACCCGT 24143 Query 45313 CAGAGTCTTCACAAAGATTTGCATGTTG 45340 || ||||| || || | ||||||| || Sbjct 24142 GAGGGTCTTGACGAACACTTGCATGGTG 24115 >seq2003 Length=103857 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || ||||| ||||||||||||||||||||| | || ||| | || || Sbjct 24525 ACCAAATGAAGCGTCGACTCCTTCTGAATGTTGTAGTCACTGAGCGTGCGGCCATCCTCA 24466 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| ||||||||||| ||||| | |||||||||||| | Sbjct 24465 AGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 24406 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| ||| || || | || || |||||| Sbjct 24405 ATCTTCGCCTTGACGTTCTCGATCGTGTCCGAGGACTCAACTTCGAGCGTGATAGTCTTG 24346 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| |||||||| || |||| |||||| Sbjct 24345 CCCGTAAGAGTCTTGACGAAGACTTGCAT 24317 >seq3352 Length=3025 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| ||||| ||||||||| |||||||||||| | || ||| |||| || Sbjct 2498 ACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCG 2439 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || || | |||||| ||||| || || | ||||||||||||| Sbjct 2438 AGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 2379 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 | || ||| || | | | |||| | ||| ||||| | || ||||||||| Sbjct 2378 ACCTTGGACTTGACGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTTG 2319 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| || ||||| | |||||||||||| Sbjct 2318 CCCGTGAGCGTCTTGATGAAGATTTGCATG 2289 >seq1131 Length=1851 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||||||||||||| |||| || | || || || || || || || || Sbjct 1851 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTGCTTGCCAGCAAA 1792 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| ||||| || || | ||||||||||||| || || ||| || Sbjct 1791 GATAAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 1732 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | ||||| ||| ||||| | ||||||||||| || ||||| ||||| || Sbjct 1731 CTCGATCGTGTCCGAGGACTCGACCTCGAGCGTAATCGTCTTTCCTGTCAGGGTCTTAAC 1672 Query 45325 AAAGATTTGCATG 45337 || | |||||| Sbjct 1671 GAAAACCTGCATG 1659 >seq3426 Length=2638 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || || | ||||||||| ||||||||| |||||||||||| |||| ||| |||| Sbjct 326 AAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCGTCC 267 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || ||||| || || | ||||| || ||||| || | |||||||||||| Sbjct 266 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGAATGCCCTCCTTGTCC 207 >seq1959 Length=18094 Score = 82.4 bits (90), Expect = 6e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| |||||||||||||||||||||| |||| || | || || || || Sbjct 145 GTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTG 86 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || |||| ||||||||||| || || | |||||||||||| ||| || Sbjct 85 CTTACCAGCAAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTT 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395058573877513