Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq3237 91.5 2e-13 >seq3237 Length=3769 Score = 91.5 bits (100), Expect = 2e-13 Identities = 385/601 (64%), Gaps = 14/601 (2%) Strand=Plus/Minus Query 36148 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 36207 ||||| || || || || ||| ||| ||||||||||| | || | ||||| || Sbjct 3285 AAACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 3226 Query 36208 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 36267 |||| || |||||||| || || ||||| || ||||| || || || ||||| || || Sbjct 3225 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCC 3166 Query 36268 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCA- 36325 || ||||| || || || || || ||||| || | ||| | ||| | | ||| ||| Sbjct 3165 CGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 3107 Query 36326 --CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 36383 | ||| ||||| | ||||| |||||||||| || || || || |||| Sbjct 3106 GGCGGTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTCTGCTTCACCACCGGGATCGTCT 3047 Query 36384 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 36443 | || ||||| || | | ||| | | || | || || ||||| | | Sbjct 3046 CAATCGCATTGAACAAAAAGTCGCGCTGCTCCGGCTCGCGGATGTACGTGTCAATGAGCA 2987 Query 36444 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAG 36503 | || | ||||| || ||||| ||||| || || || ||||| || || | | Sbjct 2986 GCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGCG 2927 Query 36504 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAA--TTTTCATTCACTATTCC 36561 |||||| ||| || || | | ||| ||||| | ||| || || || || || || Sbjct 2926 CCTCGGCGGCCTGCACCTCGGAGCTAAAGCGTTC--CAAAAGGTTCTCGTTGACAATCCC 2869 Query 36562 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTT-- 36619 ||| || ||||| ||||| | || || | ||||| | ||| ||| ||| Sbjct 2868 GTCCGATGCCGCAAAGAACGCAAGGACGTGGCTAATAAAGTGGCGCTCG-TTGTCGTTCA 2810 Query 36620 --AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATG 36677 | || | ||| || | | || || || | || | || || | ||||| || | Sbjct 2809 GGCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAACG 2750 Query 36678 ATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAA 36737 | ||||| ||||| || ||||| | ||| || || || || | || ||||| | |||| Sbjct 2749 ACGCCTCGGCCTTCTTGTACATTTGCCAAATCTCGTGGTAGCGGATGGGAAACAGGACAA 2690 Query 36738 A 36738 | Sbjct 2689 A 2689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658144391616520