Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2983 102 7e-17 seq2982 82.4 7e-11 >seq2983 Length=6149 Score = 102 bits (112), Expect = 7e-17 Identities = 258/390 (66%), Gaps = 2/390 (1%) Strand=Plus/Minus Query 21117 AACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCAC 21176 || || ||||| | ||||| || || | ||||| ||| ||||| | |||||||| Sbjct 1654 AATTGGCACAAGATATGACAGGGTGGCAATGCCATGAGCGGTAGGTCAGGCGGGTTCCAT 1595 Query 21177 GCGCACATAACGATGCGCCGATC-GTGGGGCCGCCTGTTAATTAGATCCACCACGTAACG 21235 ||| | | || ||||| || || |||||| | | || ||| ||| | || | Sbjct 1594 GCGGAGAGCACAATGCGGCGGTCAGTGGGGTT-CGTCTTGATTTGATGAATGACCTGTGC 1536 Query 21236 CAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAA 21295 ||||||||| || ||||| ||| |||| || |||||| | ||||| || ||||| Sbjct 1535 CAGCTGGTCTACACCCTGCCCCGTATAGTCGGTGTCGGCGTCGACGTACTGGGCGCCAAA 1476 Query 21296 ATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAGCC 21355 || | ||| ||||| ||||||||||| |||| |||||| || |||| |||| || Sbjct 1475 GTGCCGCCATTGGAAGCCGTACACCGGTCCCAAGTCGCCCGGACGACGGTGTCCGAGTCC 1416 Query 21356 CTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCCGCGGCGCGA 21415 | ||| | || || ||| || | | ||||| || | ||| ||| || Sbjct 1415 GCGACTCGCGAGGAATTCGGCGGAGCCATTGCCATCCCAGATGTGCACGTTGCGCTCCGC 1356 Query 21416 CAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGACGCCCCT 21475 ||| | ||| || ||| |||| |||||||| || | ||| || | ||||| | Sbjct 1355 CAGCCAGTTGGCATCCGTGTTGCCCGAAATAAACCAGAGAAGCTCTTCGAGTACGCCACG 1296 Query 21476 CCAAAACACCCTTTTGGTGGTTAACAGAGG 21505 | || || | ||||||||| | ||| || Sbjct 1295 GAAGAAAACGCGTTTGGTGGTGAGCAGCGG 1266 >seq2982 Length=6182 Score = 82.4 bits (90), Expect = 7e-11 Identities = 133/189 (70%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 20912 CAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTG 20971 |||||| || |||| || || | |||| | ||| ||||| |||||||||| || | Sbjct 1892 CAGCTGCTGCTGCAGCGGCTCGATATGGTCGAGGTACACGTGAGCGTCACCCATGGCCAG 1833 Query 20972 CACAAAGTCTCCCGGGGTCAGG-CCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGT 21030 | || || ||| ||| ||||||||||| || || || | || || || |||| Sbjct 1832 CGTGAATTCGGCCGCC-TCACATCCCGTGACGTGCGCAATGAGGTGGGTGAGTAGCGCGT 1774 Query 21031 AGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGC 21090 |||| || ||||| || || || || | ||||| ||| || | |||||||| ||||| Sbjct 1773 AGCTCGCAATGTTGAAGGGCACGCCCAAGCCCAGATCGCACGAGCGCTGGTACATCTGGC 1714 Query 21091 AGGACAGCT 21099 | || |||| Sbjct 1713 ACGAGAGCT 1705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427757997715440