Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3237 123 4e-23 >seq3237 Length=3769 Score = 123 bits (136), Expect = 4e-23 Identities = 387/592 (65%), Gaps = 13/592 (2%) Strand=Plus/Minus Query 49950 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 50009 ||||| || || || || ||| ||||||||||||||| | || || ||||| || Sbjct 3285 AAACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 3226 Query 50010 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCC 50069 |||| || |||||||| || || ||||| || ||||| || || || ||||| || || Sbjct 3225 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCC 3166 Query 50070 AGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC-TGGC-- 50126 || |||||||| || || || |||||||| || ||||| | ||| | | ||| || Sbjct 3165 CGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 3107 Query 50127 -GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 50185 || ||| ||||| | ||||| |||||||||| || || || ||||| | Sbjct 3106 GGCGGTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTCTGCTTCACCACCGGGATCGTCT 3047 Query 50186 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 50245 | || ||||| || | | ||| | | || | || || || || | | Sbjct 3046 CAATCGCATTGAACAAAAAGTCGCGCTGCTCCGGCTCGCGGATGTACGTGTCAATGAGCA 2987 Query 50246 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 50305 | || | ||||| || ||||| ||||| ||||| || ||||| || || | | Sbjct 2986 GCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGCG 2927 Query 50306 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAA--TTTTCATTCACTATTCC 50363 |||||| |||||| || | | ||| ||||| | ||| || || || || || || Sbjct 2926 CCTCGGCGGCCTGCACCTCGGAGCTAAAGCGTTC--CAAAAGGTTCTCGTTGACAATCCC 2869 Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA- 50422 ||| || ||||| ||||| | || || | ||||| || |||||| | | Sbjct 2868 GTCCGATGCCGCAAAGAACGCAAGGACGTGGCTAATAAAGTGGCGCTCGTTGTCGTTCAG 2809 Query 50423 --GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 50480 | || | ||| || | | || || || | || | || || | ||||| || || Sbjct 2808 GCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAACGA 2749 Query 50481 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAA 50532 ||||| ||||| || ||||| | ||| || || || || ||| ||||||| Sbjct 2748 CGCCTCGGCCTTCTTGTACATTTGCCAAATCTCGTGGTAGCGGA-TGGGAAA 2698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718237797722920