Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq3237 100 3e-16 seq3426 89.7 5e-13 >seq3237 Length=3769 Score = 100 bits (110), Expect = 3e-16 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 50665 GACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAG 50724 ||||| | |||||| | || | |||||||| || | |||||||| ||||||||||| Sbjct 3370 GACGCGCTGCCCGTGTCGCTGATTGGCATGAATGCGCGCCTGATGTGCCAGTACATTGAG 3429 Query 50725 TTTGTTGCAGACAGATTGTTGTTGCAGCTGGGACAACCGAAATACTATAATGC-ACGTAA 50783 ||||| || ||| | || | || |||||| | ||||| |||| || || ||| || Sbjct 3430 TTTGTGGCGGACCGCCTGCTCGTGGCGCTGGGCAACCCGAAGCACTACAACGCGACG-AA 3488 Query 50784 CCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGA 50837 |||||| |||||| | || || ||| || ||||||| | ||||||||||| Sbjct 3489 CCCCTTCGACTTTATGGAGAATATTTCGCTGCAGGGCAAGTCGAACTTTTTCGA 3542 >seq3426 Length=2638 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||||||| | || | ||||| || || || |||||||| ||||||| |||| | | Sbjct 329 CGCAAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCG 270 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || ||||| || || || ||| |||| || || ||||||||||| || ||||| || ||| Sbjct 269 TCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGAATGCCCTCCTTG 210 Query 143090 TC 143091 || Sbjct 209 TC 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506992515990960