Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq3237 100 4e-16 >seq3237 Length=3769 Score = 100 bits (110), Expect = 4e-16 Identities = 381/593 (64%), Gaps = 15/593 (3%) Strand=Plus/Minus Query 33294 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 33353 ||||| || || || || ||| ||||||||||||||| | || || ||||| || Sbjct 3285 AAACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 3226 Query 33354 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33413 |||| || |||||||| || || ||||| || ||||| || || || || || || || Sbjct 3225 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCC 3166 Query 33414 AGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC------C 33467 || |||||||| || || || || ||||| || | ||| | ||| | | ||| | Sbjct 3165 CGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 3107 Query 33468 GGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33527 |||| ||| ||||| | ||||| |||||||||| || || || ||||| Sbjct 3106 GGCG--GTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTCTGCTTCACCACCGGGATCGT 3049 Query 33528 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 33587 || || ||||| || | | ||| | | || | || || || || | Sbjct 3048 CTCAATCGCATTGAACAAAAAGTCGCGCTGCTCCGGCTCGCGGATGTACGTGTCAATGAG 2989 Query 33588 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33647 || || | ||||| || ||||| ||||| ||||| || ||||| || || | Sbjct 2988 CAGCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCG 2929 Query 33648 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCC 33707 ||||||| ||| || || | | ||| |||||| | || || || || || || Sbjct 2928 CGCCTCGGCGGCCTGCACCTCGGAGCTAAAGCGTTCCAAAAGGTTCTCGTTGACAATCCC 2869 Query 33708 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-- 33765 ||| || ||||| ||||| | || || | ||||| | |||| || ||| Sbjct 2868 GTCCGATGCCGCAAAGAACGCAAGGACGTGGCTAATAAAGTGGCGCTCGT-TGTCGTTCA 2810 Query 33766 --AGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATG 33823 | || | ||| || | | || || || | || | || || | ||||| || | Sbjct 2809 GGCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAACG 2750 Query 33824 ATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAA 33876 | ||||| ||||| || ||||| | ||| || || | || ||| ||||||| Sbjct 2749 ACGCCTCGGCCTTCTTGTACATTTGCCAAATCTCGTGGTAGCGGA-TGGGAAA 2698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622920312041480