Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1082 116 3e-21 seq2003 89.7 4e-13 seq3237 87.8 2e-12 >seq1082 Length=24331 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||||||||| || || || | || || || |||||||| |||| |||||| | Sbjct 24119 ATGCAAGTGTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTCGAGGTCGAGTCGTCG 24178 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || ||||| ||||| || ||||| ||||| || ||| Sbjct 24179 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 24238 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || ||||||||| ||||| |||| | | | ||||||| || ||| Sbjct 24239 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACGCTCAGCGACTACAAC 24298 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || || || || Sbjct 24299 ATCCAGAAGGAGTCGAC 24315 >seq2003 Length=103857 Score = 89.7 bits (98), Expect = 4e-13 Identities = 113/154 (73%), Gaps = 1/154 (1%) Strand=Plus/Plus Query 23982 CCAAACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGT 24040 ||||||| | ||||| || || ||||| || | || ||||| |||| || ||||||| Sbjct 24033 CCAAACACACATGCAGGTTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGT 24092 Query 24041 CGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACC 24100 |||| | |||||| |||||| | ||||| |||||| ||||| || ||||| || Sbjct 24093 CGAGTCGTCCGACACGATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGCATTCC 24152 Query 24101 TCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 ||| || |||||| | ||||| | | |||||| Sbjct 24153 TCCGGACCAACAGCGTCTGATCTTTGCGGGCAAG 24186 >seq3237 Length=3769 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 104611 TCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAAGGATTCAAA 104670 || ||||| || | |||||||| ||| |||||||| | |||||| ||||| || ||| Sbjct 3542 TCGAAAAAGTTCGACTTGCCCTGCAGCGAAATATTCTCCATAAAGTCGAAGGGGTTCGTC 3483 Query 104671 GTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCACAAATTCGATG 104730 | || | | || || ||| ||| | | | ||| || ||||||||||| || ||| Sbjct 3482 GCGTTGTAGTGCTTCGGGTTGCCCAGCGCCACGAGCAGGCGGTCCGCCACAAACTCAATG 3423 Query 104731 TACTCGCACATAGAATGTGCATTCATGCCCAGCATTGCGACGGGTAAAGCGTTAGTaaaa 104790 |||| |||||| | ||||||||||| | || | ||||| | |||| | || Sbjct 3422 TACTGGCACATCAGGCGCGCATTCATGCCAATCAGCGACACGGGCAGCGCGTCGGAAAGG 3363 Query 104791 aaaTCTTTCTCGATGTCCACGGCTTC 104816 || |||| ||| || |||| || || Sbjct 3362 AAGTCTTGCTCAATCGCCACCGCCTC 3337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429917906815215