Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq3198 102 1e-16 seq3042 100 3e-16 seq3121 91.5 2e-13 seq892 91.5 2e-13 seq3011 87.8 2e-12 >seq3198 Length=4014 Score = 102 bits (112), Expect = 1e-16 Identities = 137/185 (74%), Gaps = 7/185 (4%) Strand=Plus/Minus Query 126208 TCCTTGCCTCCCTCCAACCGCGTGCCAAACTGACCGTCCGGCTCCAACAACTGCACATTG 126267 |||||||| ||| | |||||||| ||||| |||| ||| | || | || ||| Sbjct 2660 TCCTTGCCGCCCATGGAGCGCGTGCCGAACTGGCCGTTGGGCATGAGCATGTTGACGTTG 2601 Query 126268 TTGGCTCCCACA-AAGTCCTGCGCAAACTTGACAATGGTC-TCGCACAGGTTCTGCTCGC 126325 ||| ||||| || ||||||||||| | ||| |||||| || | ||| |||| |||| Sbjct 2600 TTG-CTCCCGCAGAAGTCCTGCGCGAGGCCGACGATGGTCATCAC-GAGGCTCTGGTCGC 2543 Query 126326 CGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGCCGCTCAGCTGCGCAACCTTGATAAACT 126385 |||| | |||| |||| |||||||| |||||||| ||||||| |||||||| || Sbjct 2542 CGTGGTGGTAGGCGGTGTGCTCGGCGACGTAGCCCTGCAGCTGCTGCACCTTGAT---CT 2486 Query 126386 CGGTC 126390 ||||| Sbjct 2485 CGGTC 2481 >seq3042 Length=5501 Score = 100 bits (110), Expect = 3e-16 Identities = 147/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 126180 GGTGTAAATGTAGCGGGGAGCTGCCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAACTG 126239 |||| | ||||| || | | |||| |||||||| ||| | ||||| || ||||| Sbjct 1534 GGTGAAGATGTAACGCGCACTGGCCGCGTCCTTGCCGCCCATGGAGCGCGTACCGAACTG 1593 Query 126240 ACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACA-AAGTCCTGCGCAAACTTGA 126298 |||| ||| | || | || |||||| ||||| || ||||||||||||| || Sbjct 1594 GCCGTTGGGCATGAGCATGTTGACGTTGTTG-CTCCCGCAGAAGTCCTGCGCAAGGCCGA 1652 Query 126299 CAATGGTC-TCGCACAGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAG 126357 | |||||| || | |||| |||| |||||||| | ||| |||| ||||| || |||||| Sbjct 1653 CGATGGTCATCAC-CAGGCTCTGGTCGCCGTGGTGATAGGCGGTGTGCTCCGCGACGTAG 1711 Query 126358 CCGCTCAGCTGCGCAACCTTGAT 126380 || ||||||| |||||||| Sbjct 1712 CCCTGCAGCTGCTGCACCTTGAT 1734 >seq3121 Length=75378 Score = 91.5 bits (100), Expect = 2e-13 Identities = 132/181 (73%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 15018 TCGTAAAGGTTGTCATTGGCCAGATGCGCACGCCCG-AGATTGGCGACAAGTTTTGCTC- 15075 |||| |||| |||| |||||| |||| |||||| || | ||||||||||| | ||| Sbjct 74475 TCGTCAAGGCGCTCATCCGCCAGACGCGC-CGCCCGGAGCTGGGCGACAAGTTCTCCTCG 74533 Query 15076 TGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCCCAGGAAGACATGCCCTTTAC 15135 | | ||| || |||||| |||||| |||| | | ||||| |||||||| || || Sbjct 74534 CGCCACGGC-CAGAAGGGCGTGTGCGGGCTGATCGTGCAGCAGGAGGACATGCCGTTCAC 74592 Query 15136 CGCGTCAGGCATGACGCCCGACATTATCATCAACCCCAACTGCATCCCGTCCCGCATGAC 15195 || ||||| || ||||| ||||| ||||| || || ||||||| |||||||| Sbjct 74593 CGACCAGGGCATCTGCCCGGACATCATCATGAACCCGCACGGCTTCCCGTCGCGCATGAC 74652 Query 15196 C 15196 | Sbjct 74653 C 74653 >seq892 Length=110943 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 15059 GGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCCCAG 15118 |||||||||||| || || | ||||||||| ||| |||||| | | || ||| Sbjct 49895 GGCGACAAGTTTGCGTCGCGTCACGGGCAAAAGGGTACGGTCGGCATCACCTACCGCCAA 49836 Query 15119 GAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAACCCCAACTGC 15178 || || ||||||| ||||| ||||| ||||||||||| ||||||||||| || | Sbjct 49835 GAGGATTTGCCCTTCACCGCCGAGGGCATCACGCCCGACATCATCATCAACCCGCACGCC 49776 Query 15179 ATCCCGTCCCGCATGACCAT 15198 |||||| || |||||||| Sbjct 49775 ATCCCGAGTCGTATGACCAT 49756 >seq3011 Length=77352 Score = 87.8 bits (96), Expect = 2e-12 Identities = 165/243 (68%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 15407 GGACCGACGTACTATCACCGACTCAAACACATGGTAAAGGACAAGATGCACGCGCGATCG 15466 || |||| ||||| || |||||| |||||||| | ||||||||||||||| || || Sbjct 75124 GGCCCGATTTACTACCAGAAACTCAAGCACATGGTCATGGACAAGATGCACGCCCGCGCG 75183 Query 15467 CACGGACAGGTGACGACGCTCCATCGCCAGCCCAACTGCGGTCGATCGCAAGGCGGTGGC 15526 | || | | || |||| |||||||| | | || || |||| | ||||||| Sbjct 75184 CGGGGGCCGCGCGCGGTGCTCACGCGCCAGCCGACCGAGGGGCGCTCGCGCGACGGTGGC 75243 Query 15527 CTCCGCTTTGGAGAGATGGAAAAGGACTGCATTCTGGTGCACGGCGCCACCCAATTCCTC 15586 || || | || |||||||| |||||| | | | | |||||||||| || | ||| Sbjct 75244 CTGCGTCTCGGCGAGATGGAGCGCGACTGCCTGATCGGGTACGGCGCCACGCAGCTTCTC 75303 Query 15587 AACGAGCGCATGTTTCTCAACAGTGACCCGTTCCAGATTGACGTGTGCAAAGACTGCGGC 15646 ||||||| | | ||| | ||| |||| | | |||||||| | | |||||| Sbjct 75304 CTCGAGCGCCTCATGATCAGCTCGGACGCGTTTGTGGTGAACGTGTGCGAGCAGTGCGGC 75363 Query 15647 ATG 15649 || Sbjct 75364 CTG 75366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611365610792800