Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3237 98.7 1e-15 >seq3237 Length=3769 Score = 98.7 bits (108), Expect = 1e-15 Identities = 387/603 (64%), Gaps = 18/603 (3%) Strand=Plus/Minus Query 32651 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 32710 ||||| || || || || ||| ||| ||||||||||| | || | ||||| || Sbjct 3285 AAACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 3226 Query 32711 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 32770 |||| || |||||||| || || ||||| || ||||| || || || ||||| || || Sbjct 3225 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCC 3166 Query 32771 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC------C 32824 || ||||| || || || || || ||||| || | ||| | ||| | | ||| | Sbjct 3165 CGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 3107 Query 32825 GGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGT 32884 |||| ||| ||||| | ||||| |||||||||| || || || || || Sbjct 3106 GGCG--GTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTCTGCTTCACCACCGGGATCGT 3049 Query 32885 CTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAA 32944 ||| || ||||| || | | ||| | | || | || || ||||| | Sbjct 3048 CTCAATCGCATTGAACAAAAAGTCGCGCTGCTCCGGCTCGCGGATGTACGTGTCAATGAG 2989 Query 32945 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCT 33004 || || | ||||| || ||||| ||||| || || || ||||| ||||| | Sbjct 2988 CAGCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCG 2929 Query 33005 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAA--TTTTCATTCACTATT 33062 ||||||| ||| || || | | ||| ||||| | ||| || || || || || Sbjct 2928 CGCCTCGGCGGCCTGCACCTCGGAGCTAAAGCGTTC--CAAAAGGTTCTCGTTGACAATC 2871 Query 33063 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 33122 ||||| || ||||| ||||| | || || | ||||| | |||| || ||| Sbjct 2870 CCGTCCGATGCCGCAAAGAACGCAAGGACGTGGCTAATAAAGTGGCGCTCGT-TGTCGTT 2812 Query 33123 ----AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAA 33178 | || | ||| || | | || || || | || | || || | ||||| || Sbjct 2811 CAGGCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAA 2752 Query 33179 TGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAAC 33238 || ||||| ||||| || ||||| | ||| || || || || | || ||||| | || Sbjct 2751 CGACGCCTCGGCCTTCTTGTACATTTGCCAAATCTCGTGGTAGCGGATGGGAAACAGGAC 2692 Query 33239 AAA 33241 ||| Sbjct 2691 AAA 2689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633604650858800