Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2003 111 1e-19 seq1082 104 2e-17 >seq2003 Length=103857 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||| | || || |||||| | || || || | ||||| ||||||| ||||| || Sbjct 24317 ATGCAAGTCTTCGTCAAGACTCTTACGGGCAAGACTATCACGCTCGAAGTTGAGTCCTCG 24376 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| |||||| | ||| | || | ||| ||||| || || ||||| || ||||| Sbjct 24377 GACACGATCGAGAACGTCAAGGCGAAGATTCAG-GACAAGGAGGGCATTCCTCCGGACCA 24435 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || ||||| ||||| || | || |||| ||||| | | || ||||| Sbjct 24436 ACAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCAGTGACTACAA 24495 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || || ||||| ||||| || || Sbjct 24496 CATTCAGAAGGAGTCGACGCTTCATTTGGTTCT 24528 Score = 100 bits (110), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| | || ||||||||| |||| || || | |||||| ||||||| |||||||| Sbjct 24043 ATGCAGGTTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGTCGAGTCGTCC 24102 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| ||| ||| ||||| || || ||||| || |||||| Sbjct 24103 GACACGATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAA 24162 Query 25119 CAGCGGATTATTTTTGCCGGCAA 25141 ||||| | || ||||| ||||| Sbjct 24163 CAGCGTCTGATCTTTGCGGGCAA 24185 >seq1082 Length=24331 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || |||||| | || || ||||| | || ||||| | || || |||| || |||||| Sbjct 24116 ACCATGCAAGTGTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTCGAGGTCGAGTCG 24175 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| |||||| ||||| || ||| ||||| || || ||||| || ||| Sbjct 24176 TCGGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGAC 24235 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | || || |||||||| || | || |||| || || | |||| ||| Sbjct 24236 CAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACGCTCAGCGACTAC 24295 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || ||||| || | ||||| Sbjct 24296 AACATCCAGAAGGAGTCGACGCTGCACCTTGTGCT 24330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433309764068195