Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2003 114 1e-20 seq3426 93.3 4e-14 seq1131 87.8 2e-12 seq1082 86.0 5e-12 >seq2003 Length=103857 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | || || || ||| | || || || || |||| || ||||| || || | Sbjct 24317 ATGCAAGTCTTCGTCAAGACTCTTACGGGCAAGACTATCACGCTCGAAGTTGAGTCCTCG 24376 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || ||||| ||||||||||| ||||| || || ||| Sbjct 24377 GACACGATCGAGAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAA 24436 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | |||||| |||||| || || |||||| Sbjct 24437 CAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCAGTGACTACAAC 24496 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || | ||||| ||| | || | ||||| ||| Sbjct 24497 ATTCAGAAGGAGTCGACGCTTCATTTGGTTCTCCGCCTCCGCGGTGGT 24544 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||| || || ||| | || || || ||| |||| || ||||| || | || Sbjct 24043 ATGCAGGTTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGTCGAGTCGTCC 24102 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| ||| || |||||||||||||| ||||| || || ||| Sbjct 24103 GACACGATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAA 24162 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 || ||||| || ||||| ||||| Sbjct 24163 CAGCGTCTGATCTTTGCGGGCAA 24185 >seq3426 Length=2638 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| |||||||| || || || || ||||||||||| Sbjct 199 AAGATCCAGGACAAGGAGGGCATTCCGCCCGATCAGCAGCGCCTCATCTTTGCCGGCAAG 258 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| ||||| | ||| |||||||| || || || || || | || Sbjct 259 CAGCTCGAGGACGGGCGCACGCTGAGCGACTACAACATCCAGAAGGAGTCTACGCTGCAC 318 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | |||||||| ||||||| ||| Sbjct 319 CTCGTTTTGCGCCTGCGCGGCGGT 342 >seq1131 Length=1851 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||| ||||| || | || || || ||| | || || || || || || | Sbjct 1660 ATGCAGGTTTTCGTTAAGACCCTGACAGGAAAGACGATTACGCTCGAGGTCGAGTCCTCG 1719 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || || || ||||||||||||||||| || || || Sbjct 1720 GACACGATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 1779 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| ||||| ||||| ||| | |||||| ||| || | ||| |||||| Sbjct 1780 CAGCGCCTTATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACGCTGAGCGACTACAAC 1839 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 1840 ATTCAGAAGGA 1850 >seq1082 Length=24331 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | || || || || | || ||||| ||| | || || || || || | | Sbjct 24119 ATGCAAGTGTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTCGAGGTCGAGTCGTCG 24178 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || || || ||||||||||| ||||| || || ||| Sbjct 24179 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 24238 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | |||||| ||| || || ||| |||||| Sbjct 24239 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACGCTCAGCGACTACAAC 24298 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 24299 ATCCAGAAGGAGTCGAC 24315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419710336402945