Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq3237 150 4e-31 seq1293 98.7 2e-15 seq2999 96.9 7e-15 seq1087 93.3 9e-14 >seq3237 Length=3769 Score = 150 bits (166), Expect = 4e-31 Identities = 548/836 (66%), Gaps = 35/836 (4%) Strand=Plus/Minus Query 251559 GCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTT 251618 ||| ||||| || || |||||||||| ||| || || |||||| |||||||||||||| Sbjct 3546 GCGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATATTCTCCATAAAGTCGAAGGGGTT 3487 Query 251619 TGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTC 251678 || || ||||| ||||| || | ||| || || |||| | |||||| ||||||||||| Sbjct 3486 CGTCGCGTTGTAGTGCTTCGGGTTGCCCAGCGCCACGAGCAGGCGGTCCGCCACAAACTC 3427 Query 251679 CAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGCCTCAC 251737 | ||||| | |||||| | ||||||||||||| ||||| || | || || Sbjct 3426 AATGTACTGGCACATCAGGCGCGCATTCATGCCAATCA-GCGACACGGGCAGCGCGTCGG 3368 Query 251738 AGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAG 251797 | | ||| || | || | || || ||||| | || |||||| ||| | | | Sbjct 3367 AAAGGAAGTCTTGCTCAATCGCCACCGCCTCGGTAATGATGCGGTTCACC-GTGTCGGGG 3309 Query 251798 ACAGCTTG-TTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAACTGTTGGTGCAGACCCTC 251855 || | |||| || | |||| | || || |||| | |||||||||||| Sbjct 3308 TGCGCGCGCTTCTTGAGGTGGCCAAACAGCAGGCACG-CAAAGTCGGTGTGCAGACCCTC 3250 Query 251856 GTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAG 251915 ||| || ||||| |||||| || | |||||| ||||||| || || ||| | || Sbjct 3249 GTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAG 3190 Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAAC 251975 ||||||||| | | ||| || || ||||| | | ||||| || | | || || Sbjct 3189 CCAGAAGATCGAGGCAAACGAGCCCGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCAC 3130 Query 251976 AAGGCGCTCAGCAAACGACTTGTCCTGCG-----ACAAGAACTTCTGTGCCCATGCTGCC 252030 ||||||||| | |||||| | | ||| | | | | ||||| | ||| Sbjct 3129 AAGGCGCTCCGAGAACGAC--GCACGGCGGTCGCTGATCCAGCGCAGCGCCCACTCGGCC 3072 Query 252031 TTCT--TTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCAT 252088 |||| ||| ||| | ||||| || || || |||| || | | ||| ||| | || Sbjct 3071 TTCTGCTTC--ACCACCGGGATCGTCTCAATCGCATTGAACAAAAAGT--CGCGCTGCTC 3016 Query 252089 CG--TCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTT 252146 || || |||| || |||| || || ||||| ||||||| |||||| || | Sbjct 3015 CGGCTCGCGGATGTACGTGTCAATGAGCAGCGAGTAGGTCTCCGAGTGGATGTTCTCAAT 2956 Query 252147 GAACATCTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGG--TG-ACTTCCGTGGAAAA 252203 | |||||| || | | || || ||||| || ||| || || || | | ||| Sbjct 2955 CATGATCTGGAAACCGT--AAAAGCAGCGCGCCTCGG-CGGCCTGCACCTCGGAGCTAAA 2899 Query 252204 GTTGTTTGCAATGTTCTCCATCACCATGCCAT-CGCTGCCTGCAAAGAAGCCAAGAATGG 252262 | | || |||||| | || || || | || |||| |||||||| |||| | | Sbjct 2898 GCGTTCCAAAAGGTTCTCGTTGACAATCCCGTCCGATGCC-GCAAAGAACGCAAGGACGT 2840 Query 252263 TCTTGATGAAGTGACGCTCATCGTCGTT---GAGCTTGTCACGCCAGTCGGCAATGTCCT 252319 | || ||||| ||||| | |||||| | | ||||| ||||||| | ||||| Sbjct 2839 GGCTAATAAAGTGGCGCTCGTTGTCGTTCAGGCGGTTGTC---CCAGTCGTGCAGGTCCT 2783 Query 252320 GATTCAGAGGAACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATT 252375 ||| || || || | |||||||| | | | | ||||||||||||||| Sbjct 2782 TGGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGCCTCGGCCTTCTTGTACATT 2727 >seq1293 Length=22598 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| |||||||||| || || |||| | || || || || || | Sbjct 681 GGCCCCAACGGTTCGGGTAAGTCGACGCTGGTCAAGCTGGTGGTCGGTGACACGGAGCCG 622 Query 280239 ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCT 280298 | ||||| | |||||||| |||||| || ||| | |||||||| |||||||| Sbjct 621 AACGAGGGTGAGCTGTGGAAGCACCCCAACCTGGTGATTGGCTACGTCGCCCAGCACGCC 562 Query 280299 TTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTA 280357 |||||||||||||| | |||||||||| ||| || | | ||||| | |||||||| Sbjct 561 TTCCACCACATCGACCAGCACCTGGACAAGACGCCGCTCGAGTACATGCTCTGGCGCTA 503 Score = 84.2 bits (92), Expect = 4e-11 Identities = 152/220 (69%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||| || ||||| ||||| | ||||||||||| || |||| ||||||||||| ||| Sbjct 1512 GGTGTCGACCTGTGCAACTGTCAGTTCTCGCTCGCCTACGGTGCCAAGATTCTGCTCAAC 1453 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | | || | ||||||||||| |||| || ||||| || | ||| || || Sbjct 1452 ACGGCGACGCTGCGCCTCAAGCGTGGCCACCGCTACGGTCTGTGTGGCCGCAACGGTTCG 1393 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATT-TCCTAACGC 279523 || ||| || | ||||||||||| ||||| ||| | || || || ||| | | Sbjct 1392 GGCAAGTCGACGTTGATGCGCGCCATCCAGAACGGCCAGGTCGAGGGCTTCCCCTCGCCC 1333 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563 | ||||| | || ||| || ||||||||| ||||| Sbjct 1332 GAC-GAGGTGCGTACCTGGTACGTCGAGCACGACCTCGAC 1294 >seq2999 Length=5894 Score = 96.9 bits (106), Expect = 7e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 ||||||||||| || || ||||| || ||||| || || ||||| || || || |||||| Sbjct 3462 GGTGTCATTGGCCCGAACGGTGCCGGCAAGTCGACGCTGATCAAGGTGCTCACCGGCGAG 3521 Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 | | | || ||||| || |||||| |||||| |||| | || | | || Sbjct 3522 ATCGTCCCGACCGAGGGCAAGGTCGAGAAGCACCCCAACCTGCGTGTCGCGCTCATGGCA 3581 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349 |||||||| ||||||||| ||||| | ||||| || | ||| | ||| ||||| Sbjct 3582 CAGCACGCGTTCCACCACCTCGAGCAGCACCTCGAGAAGACCGCGTGCCAGTACATCACC 3641 Query 280350 TGGCGCTA 280357 |||||||| Sbjct 3642 TGGCGCTA 3649 >seq1087 Length=1975 Score = 93.3 bits (102), Expect = 9e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||| || ||||| |||| | ||||||||||| || |||| ||||||||||| ||| Sbjct 1512 GGTGTCGACCTGTGCAACTGCCAGTTCTCGCTCGCCTACGGTGCCAAGATTCTGCTCAAC 1453 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | | || | ||||||||||| |||| || ||||| || | ||| || || Sbjct 1452 ACGGCGACGCTGCGCCTCAAGCGTGGCCACCGCTACGGTCTGTGTGGCCGCAACGGTTCG 1393 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATT-TCCTAACGC 279523 |||||| || || ||||||||||| ||||||||| | || || || ||| | | Sbjct 1392 GGTAAGTCGACGCTGATGCGCGCCATCCAGAACGGTCAGGTTGAGGGCTTCCCCTCGCCC 1333 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563 | ||||| | || ||| || ||||||||| ||||| Sbjct 1332 GAC-GAGGTGCGCACCTGGTACGTCGAGCACGACCTCGAC 1294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027791326893973