Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq2003 113 4e-20 seq1959 104 2e-17 seq1131 104 2e-17 seq1082 100 2e-16 >seq2003 Length=103857 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | ||| ||||| | ||| || || || ||||||||||| || Sbjct 24546 ATACCACCGCGGAGGCGGAGAACCAAATGAAGCGTCGACTCCTTCTGAATGTTGTAGTCA 24487 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | || || ||| ||||| || || ||||| |||| |||||||||||||||||| Sbjct 24486 CTGAGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGA 24427 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| || | | || | ||||| | ||| || Sbjct 24426 GGAATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTCTCGATCGTGTCCGAGGACTCA 24367 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| || ||||| || || || | ||||| Sbjct 24366 ACTTCGAGCGTGATAGTCTTGCCCGTAAGAGTCTTGACGAAGACTTGCAT 24317 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 114250 AGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCT 114309 |||| |||||||||||||||||||||||||| || ||||| |||||| || | | Sbjct 24175 AGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTTGCCTTGACGT 24116 Query 114310 GTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 114369 || | ||||||| || ||||| || | || | ||| || || |||||||| |||| Sbjct 24115 TCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTTCCTGTCAGAGTCTTTA 24056 Query 114370 CAAAAATCTGCATG 114383 | |||| ||||||| Sbjct 24055 CGAAAACCTGCATG 24042 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 ||| ||||| || || || || |||| |||||||||||||||||||||||||| || || Sbjct 24910 ATCCTCAAGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTT 24851 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 || |||||| || | | ||||| |||||| | ||||| || |||| || | Sbjct 24850 ATCTTGAATCTTCGCCTTCACGTTTTCAATGGTGTCAGACGATTCCACTTCCAATGTAAT 24791 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| ||||| || || || || || || | ||||| Sbjct 24790 CGTCTTGCCCGTAAGGGTCTTGACGAAGACTTGCAT 24755 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || || |||||||| ||||||| ||||| ||| || || || || || Sbjct 24286 CGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCGAGCTGCTTGCC 24227 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTC 114283 || |||| |||||||||||||||||||||||||| || Sbjct 24226 CGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTC 24188 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | ||| || || || || |||||||| ||| Sbjct 25038 ATACCACCACGAAGACGGAGGACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCG 24979 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| ||||| ||| ||||| || || || || |||| |||||||||||||||||| Sbjct 24978 CTCAGGGTACGGCCATCCTCAAGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGA 24919 Query 114273 G 114273 | Sbjct 24918 G 24918 >seq1959 Length=18094 Score = 104 bits (114), Expect = 2e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| ||||| || | | || | || | ||| || || || ||||||||||| |||| Sbjct 170 TACCACCACGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGC 111 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 ||| ||||| ||| ||||| || |||||||| |||| || |||||||||||||| | Sbjct 110 TCAGCGTACGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCCGGGG 51 Query 114274 GAATGCCTTCTTTGTCGGCAATCTT 114298 ||||||| || ||||| |||||| Sbjct 50 GAATGCCCTCCTTGTCCTGAATCTT 26 >seq1131 Length=1851 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || ||||||||||| ||||||| ||||| ||| ||||| || || ||||| || Sbjct 1850 TCCTTCTGAATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAG 1791 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || || ||||| |||||||| ||||| || || ||||| ||||| || | | Sbjct 1790 ATAAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 1731 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||| | ||| ||||| || | || | ||| || || ||||| || || || Sbjct 1730 TCGATCGTGTCCGAGGACTCGACCTCGAGCGTAATCGTCTTTCCTGTCAGGGTCTTAACG 1671 Query 114372 AAAATCTGCATG 114383 |||| ||||||| Sbjct 1670 AAAACCTGCATG 1659 >seq1082 Length=24331 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || || |||||||| ||||| | ||||| ||| || || || || || Sbjct 24316 CGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTACGGCCATCCTCGAGCTGCTTGCC 24257 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 ||| |||| || ||||||||||||||||||||||| || ||||| ||||| || Sbjct 24256 GGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 24197 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | |||||| | || ||||| || | ||| | ||| || || || || || Sbjct 24196 CACATTCTCGATGGTGTCCGACGACTCGACCTCGAGGGTAATCGTCTTACCCGTGAGGGT 24137 Query 114365 TTTTACAAAAATCTGCATGG 114384 || || || | ||||||| Sbjct 24136 CTTGACGAACACTTGCATGG 24117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420116719300236