Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2003 125 2e-23 seq3352 111 4e-19 seq3042 111 4e-19 seq1082 105 2e-17 seq3198 87.8 4e-12 >seq2003 Length=103857 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | ||||| ||| || || || || || ||||| | Sbjct 24543 CCACCGCGGAGGCGGAGAACCAAATGAAGCGTCGACTCCTTCTGAATGTTGTAGTCACTG 24484 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || || ||||||||||||||||| || Sbjct 24483 AGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGGA 24424 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || ||||| || ||||| || || | || || || ||| Sbjct 24423 ATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTCTCGATCGTGTCCGAGGACTCAACT 24364 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| ||||| || || |||||||||||||| | ||||| Sbjct 24363 TCGAGCGTGATAGTCTTGCCCGTAAGAGTCTTGACGAAGACTTGCAT 24317 Score = 100 bits (110), Expect = 7e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || || ||||||||||||||||| || || || || || || ||||| || Sbjct 24185 TTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTT 24126 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || || ||||| || || | ||| ||| || |||||||| ||||||||||| || ||| Sbjct 24125 GCCTTGACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTTCCTGTC 24066 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| | |||||| Sbjct 24065 AGAGTCTTTACGAAAACCTGCAT 24043 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 288310 GTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATT 288369 ||||| || || || | || || || || ||||||||||||||||| || || Sbjct 24918 GTGCGGCCATCCTCAAGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAATG 24859 Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 || || ||||| || || ||||| ||||||||||| || | || |||||| ||||| Sbjct 24858 CCCTCCTTATCTTGAATCTTCGCCTTCACGTTTTCAATGGTGTCAGACGATTCCACTTCC 24799 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || |||||||| || || || ||||||||||| | ||||| Sbjct 24798 AATGTAATCGTCTTGCCCGTAAGGGTCTTGACGAAGACTTGCAT 24755 >seq3352 Length=3025 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||| ||||||||| ||||| || | || || || || ||| Sbjct 2480 TCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCAAAG 2421 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || ||||| || || || ||||||| || | || ||| Sbjct 2420 ATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGACCTTGGACTTGACGACG 2361 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||||||| || || ||||||||||||||||| || || || ||||||| | Sbjct 2360 TCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTTGCCCGTGAGCGTCTTGATG 2301 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 2300 AAGATTTGCAT 2290 >seq3042 Length=5501 Score = 111 bits (122), Expect = 4e-19 Identities = 307/452 (68%), Gaps = 18/452 (4%) Strand=Plus/Plus Query 325322 ATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCC 325381 || || || ||||| || ||||| || ||| | | || |||||||||||| | Sbjct 1541 ATGTAACGCGCACTGGCCGCGTCCTTGCCGCCCATGGAGCGCGTACCGAACTGGCCGTTG 1600 Query 325382 GGCAACAACCAGTTGATGTTATTGCTTCCGACATAA-TCCTGTGCAAGGTTCACGATGGT 325440 |||| | | ||||| ||| ||||| ||| || || ||||| |||||| |||||||| Sbjct 1601 GGCATGAGCATGTTGACGTTGTTGCTCCCG-CAGAAGTCCTGCGCAAGGCCGACGATGGT 1659 Query 325441 CCCTTGCAGAGATGCT--TCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTG 325498 | ||| | | || ||||| |||||||||||| | ||||| || ||||| || ||| Sbjct 1660 CATCACCAG-GCT-CTGGTCGCCGTGGTGATAGGCGGTGTGCTCCGCGACGTAGCC-CTG 1716 Query 325499 -AACTG-TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTG-AATATATCACT 325555 | ||| ||| ||||| | |||||| | | ||||||||| |||| | | | | ||| Sbjct 1717 CAGCTGCTGC-ACCTTGATTTCGGTCTTGAGGTTGCGCTTG-AAGCAGCCAAACAGCACC 1774 Query 325556 TTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTAC 325615 || || || || || || || || || |||||||| ||| || ||| | Sbjct 1775 TTGCGCTGCCCGGGCTTCAAGCCGTCGACCACCGACGGGATGGAGCGGATGTTGTCGGCC 1834 Query 325616 CGCGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGGAACCTCGGGCTTCTTG 325675 |||||| | || || ||||||| ||| ||||||| | ||| | || | | | | Sbjct 1835 ATCGAGAAGAGGATCAGCTCCTTGTTGATAAAGTCGGCGATGGGGATCTGGCGGATGCGG 1894 Query 325676 TGGTCAAGTTGATTTCCTGGTTCGTA-TGCCGTCATCCACTCCTTGCGATCCTCGGC--T 325732 |||||||| | | || || | | || || || |||||||||||| || ||||| | Sbjct 1895 TGGTCAAGGTAGGTGCCGGGCACAAACTGGCG-CAGCCACTCCTTGCGGTCGTCGGCCTT 1953 Query 325733 CGTGACTTGTTGAAAGAACGGTCAATGAGCTC 325764 | | ||||||||| | |||| | ||||| Sbjct 1954 CTT--CTTGTTGAACGCGAGGTCCACAAGCTC 1983 >seq1082 Length=24331 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||| |||||| || || || || | || || || |||||| Sbjct 24309 TCCTTCTGGATGTTGTAGTCGCTGAGCGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAG 24250 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| |||||||| || || || || || |||||||| || || ||||| || Sbjct 24249 ATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTC 24190 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || ||| || || ||||| || |||||||| || || || ||||||||| Sbjct 24189 TCGATGGTGTCCGACGACTCGACCTCGAGGGTAATCGTCTTACCCGTGAGGGTCTTGACG 24130 Query 288463 AATATCTGCAT 288473 || | ||||| Sbjct 24129 AACACTTGCAT 24119 >seq3198 Length=4014 Score = 87.8 bits (96), Expect = 4e-12 Identities = 278/412 (67%), Gaps = 28/412 (7%) Strand=Plus/Minus Query 325367 CCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAA-TCCTGTGC 325425 ||||||||||| | |||| | | ||||| ||| ||||| ||| || || ||||| || Sbjct 2636 CCGAACTGGCCGTTGGGCATGAGCATGTTGACGTTGTTGCTCCCG-CAGAAGTCCTGCGC 2578 Query 325426 AAGGTTCACGATGGTCCCTTGCAGAGATGCT--TCGCCATGGTGATAGGCGCTATGCTCT 325483 ||| ||||||||| | ||| || ||||| ||||| |||||| | ||||| Sbjct 2577 GAGGCCGACGATGGTCA--TCACGAGGCTCTGGTCGCCGTGGTGGTAGGCGGTGTGCTCG 2520 Query 325484 GCAACGTAACCGCTGAA-CTG-TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAA-- 325539 || ||||| || ||| | ||| |||| |||| | |||||| | | ||||||||||| Sbjct 2519 GCGACGTAGCC-CTGCAGCTGCTGCA-CCTTGATCTCGGTCTTGAGGTTGCGCTTGAAGC 2462 Query 325540 AGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCT 325599 ||| || | | ||| || || || || || | || || || |||||||| ||| Sbjct 2461 AGCCGA--ACAGCACCTTGCGCTGCCCGGGCTTCAGGCCGTCGACCACCGACGGGATGGA 2404 Query 325600 TCGTTCCAGATCGTACCG----CGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAA 325655 || | | || ||| |||||| | || || ||||||| ||| ||||||| | Sbjct 2403 GCG---GATGTTGT-CCGCCATCGAGAAGAGGATGAGCTCCTTGTTGATAAAGTCGGCGA 2348 Query 325656 CGGGAACCTCGGGCTTCTTGTGGTCAAGTTGATTTCCTGGTTCGTA-TGCCGTCATCCAC 325714 ||| | || | | | |||||| || | | || || | | || || || |||| Sbjct 2347 TGGGGATCTGGCGGATGCGGTGGTCGAGGTAGGTGCCGGGCACAAACTGGCG-CAGCCAC 2289 Query 325715 TCCTTGCGATCCTCGGC--TCGTGACTTGTTGAAAGAACGGTCAATGAGCTC 325764 || ||||| || ||||| || | ||||||||| | |||| | |||||| Sbjct 2288 TCTTTGCGGTCGTCGGCCTTCTT--CTTGTTGAACGCGAGGTCGACGAGCTC 2239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179602210246134