Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2003 109 5e-19 seq3352 100 3e-16 seq990 98.7 1e-15 seq3426 93.3 4e-14 seq1082 84.2 2e-11 >seq2003 Length=103857 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || | ||||| |||||| || || ||||||||||| || Sbjct 24544 ACCACCGCGGAGGCGGAGAACCAAATGAAGCGTCGACTCCTTCTGAATGTTGTAGTCACT 24485 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | || |||||||||||||| ||| | || || ||||| ||||| ||||| Sbjct 24484 GAGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGG 24425 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| || ||| | || || || || || Sbjct 24424 AATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTCTCGATCGTGTCCGAGGACTCAAC 24365 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | |||||||| || | ||| || ||||| | |||||| Sbjct 24364 TTCGAGCGTGATAGTCTTGCCCGTAAGAGTCTTGACGAAGACTTGCAT 24317 >seq3352 Length=3025 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || || | |||||| || || || |||||||| || || ||||| |||| Sbjct 2502 AAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTC 2443 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||| ||| | ||||||||||||||||| || || || || || || || Sbjct 2442 CTCGAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 2383 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | || ||| || || || | || || | | || || || | || | || Sbjct 2382 CTGGACCTTGGACTTGACGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGT 2323 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | || || | ||| |||||||| Sbjct 2322 CTTGCCCGTGAGCGTCTTGATGAAGATTTGCAT 2290 >seq990 Length=2172 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||||||||||| | || || || || | |||||| || || || |||||||| || Sbjct 346 ACCGCCGCGCAGGCGCAGGACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 287 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || ||||||||||||||| | ||||| ||||||||||| || || Sbjct 286 CAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGCGG 227 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 || || || || || || || || Sbjct 226 GATGCCCTCCTTATCCTGGATCTT 203 >seq3426 Length=2638 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||||||||||| | | || || || | ||| || || || || |||||||| || Sbjct 342 ACCGCCGCGCAGGCGCAAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCT 283 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || ||||||||||||||| | ||||| |||||||| ||||| || Sbjct 282 CAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGG 223 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| || || || || || || || Sbjct 222 AATGCCCTCCTTGTCCTGGATCTT 199 >seq1082 Length=24331 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | |||||| || || || |||||||| || || || || | || Sbjct 24330 AGCACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTACGGCCATCC 24271 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | || || ||||| ||||| |||||||| || || || || Sbjct 24270 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 24211 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGG 64409 || || || ||| ||| ||| | || | ||| || || || || | || | | Sbjct 24210 TGGATCTTGGCCTTCACATTCTCGATGGTGT--CCGACGACTCGACCTCGAGGGTAATCG 24153 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| || || | || || ||||| | |||||| Sbjct 24152 TCTTACCCGTGAGGGTCTTGACGAACACTTGCAT 24119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499623234081320