Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3061 118 1e-21 seq2003 91.5 1e-13 >seq3061 Length=5265 Score = 118 bits (130), Expect = 1e-21 Identities = 428/660 (65%), Gaps = 21/660 (3%) Strand=Plus/Plus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 ||||| ||||| || || || ||||||||||| || || | ||| | ||||| | Sbjct 1001 AAGGTGGCCGAGCGCCCCCAGCACATGCTCATGCGTGTGGCGGTGGGCATCCACGGCACC 1060 Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 ||| |||| | ||||| ||| || ||| | ||||||| | || || |||||||| Sbjct 1061 GACGTCGAGAGCGCGATCGAGACGTACAACATGATGTCGGAGAAGGCCTTTACGCACGCC 1120 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077 || || | ||| ||| |||||| | || ||| |||| ||||| || || | Sbjct 1121 TCGCCGACGCTCTTCAACGCGGGCACGCCGAGCCCGCAGATGTCGTCGTGCTTCCTGGTG 1180 Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATT---GCGCGTTG 123134 | || || ||| ||| || ||||| || || || | | | | ||| || Sbjct 1181 TGCATGAAGGACGACTCGATCGAGGGCATCTACGACAC---GCTCAAGTCGTGTGCGATG 1237 Query 123135 ATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGC 123194 || ||||| | |||||||| || | ||| | ||| | | | ||| ||| || Sbjct 1238 ATCTCCAAGACGGCGGGCGGCATTGGTCTCAACATCCACTGCATCCGCGGCA-CGG--GC 1294 Query 123195 -CG--CATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTAC 123251 || ||| |||| |||| | | ||| | | ||||||| || || ||| Sbjct 1295 TCGTACATTGCCGGCACGAACGGTGTGAGCAACGGCATTGTGCCCATGCTCCGCGTGTAC 1354 Query 123252 AATAACGCCGTGCGGCACGTCGACCAGGGCGGCAAA---CGCAAAGGCGCGATGGCGATC 123308 || ||| | | ||| ||||||||||||| ||||| ||| ||||| | || ||| Sbjct 1355 AACAACACGGCGCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGCGCCTTTGCCATC 1414 Query 123309 TATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGG- 123367 || || || ||||||||| || |||| || ||| | | | ||||| | Sbjct 1415 TACCTCGAGCCGTGGCACTCGGACGTGTTTGAGTTTATCGACCTG---CGCAAGAACCAC 1471 Query 123368 GGC--GGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTT 123425 ||| |||||| | || ||||| |||| ||||| | ||||| || || ||||| Sbjct 1472 GGCAAGGAAGAGGTGCGCGCGCGCGACCTGTTCTACGCGCTGTGGGTGCCGGACCTGTTT 1531 Query 123426 ATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGC 123485 ||||| || || | | | ||||| ||| |||| ||||| |||| | |||||| Sbjct 1532 ATGCGCCGTGTCGAGCAGGGCGGCGACTGGACGCTGATGTGCCCCGCCGAGGCGCCCGGC 1591 Query 123486 TTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGC 123545 | |||| |||||| | ||||||||||| |||||| || ||||||||||| ||| Sbjct 1592 CTCGCCGACTGCTACGGCGAGGAGTTTGACGAGCTGTACGAGCGCTACGAGCGCGAGGGC 1651 >seq2003 Length=103857 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||| || || |||||||| |||||||| || || ||||| || ||| |||| || | Sbjct 24173 ATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTTGCCTTGA-CGTT 24115 Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || | |||||||| |||||||||||||| || | ||| || || || ||||| ||||| Sbjct 24114 CTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTTCCTGTCAGAGTCTTTAC 24055 Query 45329 AAAAATTTGCAT 45340 |||| ||||| Sbjct 24054 GAAAACCTGCAT 24043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451983690411880