Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3352 140 4e-28 seq3426 120 3e-22 seq1082 109 6e-19 seq2003 107 2e-18 seq990 102 9e-17 seq1131 95.1 1e-14 >seq3352 Length=3025 Score = 140 bits (154), Expect = 4e-28 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| ||||||||| || ||||| |||| || Sbjct 2499 CACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTC 2440 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||| || || || | ||||||||||| | || | | |||||||||| Sbjct 2439 GAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 2380 Query 46504 GATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 || ||| ||||| || || | | |||||||||||| || || || | |||||| || | Sbjct 2379 GACCTTGGACTTGA-CGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCT 2321 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||| ||||| || | ||||||||||| Sbjct 2320 TGCCCGTGAGCGTCTTGATGAAGATTTGCAT 2290 >seq3426 Length=2638 Score = 120 bits (132), Expect = 3e-22 Identities = 105/131 (80%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| || || |||| ||| |||||| ||||| ||||||||| || |||||| || Sbjct 329 CGCAAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCG 270 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || ||||||||||||||||| || || | ||||||||| |||| ||| | || ||||||| Sbjct 269 TCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGAATGCCCTCCTTG 210 Query 46499 TCCATGATCTT 46509 ||| |||||| Sbjct 209 TCCTGGATCTT 199 >seq1082 Length=24331 Score = 109 bits (120), Expect = 6e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| ||||||||| || || || | || || Sbjct 24328 CACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTACGGCCATCCTC 24269 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| |||| |||||| ||||| | || | || |||||||||| Sbjct 24268 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 24209 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| | || | | ||||| ||| || || || | || || || || Sbjct 24208 GATCTTGGCCTTCACATTCTCGATGGTGTCCGACGACTCGACCTCGAGGGTAATCGTCTT 24149 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || | |||||| Sbjct 24148 ACCCGTGAGGGTCTTGACGAACACTTGCAT 24119 >seq2003 Length=103857 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||| || ||||| | || || ||||||||||| || || Sbjct 24508 CTCCTTCTGAATGTTGTAGTCACTGAGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAA 24449 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||| ||||| | || | || |||||||||| |||||| ||||| | Sbjct 24448 GATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTT 24389 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| || || || || | |||||| || |||||||| || || || || Sbjct 24388 CTCGATCGTGTCCGAGGACTCAACTTCGAGCGTGATAGTCTTGCCCGTAAGAGTCTTGAC 24329 Query 46582 AAAGATTTGCAT 46593 |||| |||||| Sbjct 24328 GAAGACTTGCAT 24317 Score = 84.2 bits (92), Expect = 2e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 46428 GAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCA 46487 ||||||| | || || ||||||||||| || || |||| ||||| ||||| | || | Sbjct 24920 GAGTGCGGCCATCCTCAAGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAA 24861 Query 46488 CGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACAT 46547 || |||||| || |||||| ||| | | | | ||||| ||||||||| | Sbjct 24860 TGCCCTCCTTATCTTGAATCTTCGCCTTCACGTTTTCAATGGTGTCAGACGATTCCACTT 24801 Query 46548 CCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || |||||||| || || || || |||| |||||| Sbjct 24800 CCAATGTAATCGTCTTGCCCGTAAGGGTCTTGACGAAGACTTGCAT 24755 >seq990 Length=2172 Score = 102 bits (112), Expect = 9e-17 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || || |||| || |||||| ||||| ||||||||| || |||||| || Sbjct 333 CGCAGGACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCG 274 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || ||||||||||||||||| || || | ||||||||||| | ||| | || |||||| Sbjct 273 TCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTA 214 Query 46499 TCCATGATCTT 46509 ||| |||||| Sbjct 213 TCCTGGATCTT 203 >seq1131 Length=1851 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||| || || || | || || ||||||||||| || || Sbjct 1851 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTGCTTGCCAGCAAA 1792 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | | |||||||||| |||||| ||||| | Sbjct 1791 GATAAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 1732 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| || || || || | ||| || || || || ||||| || ||||| Sbjct 1731 CTCGATCGTGTCCGAGGACTCGACCTCGAGCGTAATCGTCTTTCCTGTCAGGGTCTTAAC 1672 Query 46582 AAAGATTTGCAT 46593 || | ||||| Sbjct 1671 GAAAACCTGCAT 1660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565214002897560