Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq2982 91.5 1e-13 seq2983 82.4 6e-11 >seq2982 Length=6182 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29763 TGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAG 29822 |||||| |||| | ||||| | | ||||| || |||||| || | || || || Sbjct 1919 TGTGGGGAAGGCCCGAGGCTCGCGCATCAGCTGCTGCTGCAGCGGCTCGATATGGTCGAG 1860 Query 29823 GTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 29882 ||| ||||||||||| |||| || | || || ||| || || |||||||| Sbjct 1859 GTACACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGCCGCCTCACATCCCGTGACGTG 1800 Query 29883 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCAT 29942 || || | || ||||| || | |||||| || ||||| ||||| || || | |||| Sbjct 1799 CGCAATGAGGTGGGTGAGTAGCGCGTAGCTCGCAATGTTGAAGGGCACGCCCAAGCCCAG 1740 Query 29943 GTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT 29977 || | ||| | |||||| | ||| |||||||||| Sbjct 1739 ATCGCACGAGCGCTGGTACATCTGGCACGAGAGCT 1705 >seq2983 Length=6149 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/232 (68%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 29747 TCCTGTTTA-TCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGC 29805 ||| ||||| || | | |||||| ||||||| ||||| | | ||||| || || | Sbjct 1936 TCCCGTTTAATCTTAATTGTGGGGAAGGGTCGCGGCTCGCGCATCAGCTGCTGCTGCAAC 1877 Query 29806 GGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGT 29865 || || | || | ||||| ||||||||||| |||| || | || || ||| | Sbjct 1876 GGCTCAATATGGTTGAGGTATACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGCCGCT 1817 Query 29866 TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAG 29925 || || || || || || || | || ||||| || | || || || ||||| ||| Sbjct 1816 TCGCATCCCGTCACATGTGCGATGAGGTGGGTGAGTAGCGCATAACTTGCAATGTTGAAG 1757 Query 29926 GGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT 29977 || || || | ||||| || | ||| | |||||| | ||| || ||||||| Sbjct 1756 GGCACGCCCAACCCCAGATCGCACGAGCGCTGGTACATCTGGCATGAGAGCT 1705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408600403966769