Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2003 86.0 5e-12 >seq2003 Length=103857 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| ||||| ||| || ||||| ||||| ||| || | || | || || Sbjct 24525 ACCAAATGAAGCGTCGACTCCTTCTGAATGTTGTAGTCACTGAGCGTGCGGCCATCCTCA 24466 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || ||||| ||||| |||||||| |||| |||| |||||||||||| | Sbjct 24465 AGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 24406 Query 48678 ATCTT 48682 ||||| Sbjct 24405 ATCTT 24401 Score = 84.2 bits (92), Expect = 2e-11 Identities = 110/151 (73%), Gaps = 1/151 (1%) Strand=Plus/Minus Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| || ||||| ||||| |||||||| |||| |||| |||||||||||| ||||| Sbjct 24186 CTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTT 24127 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 | || || | | | || |||| ||| || || | || ||||| ||||| || Sbjct 24126 TGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTTCCTGT 24067 Query 48743 CAAAGTTTTTACAAAAATCTGCATCGTGTGT 48773 || ||| ||||| |||| |||||| |||||| Sbjct 24066 CAGAGTCTTTACGAAAACCTGCAT-GTGTGT 24037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380921568836319