Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3008 93.3 1e-13 seq892 93.3 1e-13 seq2127 84.2 6e-11 >seq3008 Length=5777 Score = 93.3 bits (102), Expect = 1e-13 Identities = 177/259 (68%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || || || || || || || || | || || |||| || |||||||| | ||| Sbjct 2791 GTCTTGACCGCGGTGTCGATCAGCCCCTCGCGCCCGGCCATCGCGTGGAAGAAGAACTCG 2732 Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739 | || || || | | | ||| |||| ||||| || |||| |||||||| | Sbjct 2731 TGCGCGGTGAGGCCGCGCAGGTACGAGTTCTCGACGAACCCGCGCGACTCGGGCGTGAAG 2672 Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799 ||| |||||||||||| |||||| | | || ||||| | ||||| ||||| || Sbjct 2671 TCGTCCTTGGTAAAGTGCGGCAGGCTGCGGTGGCGGAAGCCGAACGGGATGCGCTTGCCC 2612 Query 302800 TCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTA--AATCACTGCCCT 302857 || ||| |||||| || | ||||| ||||||||| || || | || | ||||| Sbjct 2611 TCGACGGACTGCTGGCCGACGCACGCGGACATCTGCGAGATGTTGATGAACGA--GCCCT 2554 Query 302858 TGGAGCCAGCATTTACCAT 302876 ||||||| || | ||||| Sbjct 2553 TGGAGCCCGCGATCACCAT 2535 >seq892 Length=110943 Score = 93.3 bits (102), Expect = 1e-13 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 251488 CCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCC 251547 ||||| || |||||||| || |||||||| ||||||||||| |||||||| ||||| | Sbjct 49399 CCGTGCGAGATCATACAGTCGCGCTCCATCTCACCGAAACGCAGACCACCGTCGCGCGAG 49458 Query 251548 CTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGC 251607 | ||||||| | ||||| || ||||| | || ||| || | || || | Sbjct 49459 CGACCCTCGACGGGCTGGCGTGTGAGGATCTGCACAGGCCCACGCGCACGCGAGTGGATC 49518 Query 251608 TTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGA 251653 || || | ||||||||||| || ||||||||| | | || |||| Sbjct 49519 TTGTCGTCGACCATATGCTTCAGGCGCTGGTAGTAGGTAGGGCCGA 49564 >seq2127 Length=17122 Score = 84.2 bits (92), Expect = 6e-11 Identities = 175/259 (68%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || || || || || || ||||| | || || |||| || |||||||| | ||| Sbjct 2788 GTCTTGACCGCGGTGTCGATCAGACCCTCGCGCCCGGCCATGGCGTGGAAGAAGAACTCG 2729 Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739 | || || || | | | ||| |||| || || ||||||| |||||||| | Sbjct 2728 TGCGCGGTGAGGCCACGCAGGTACGAGTTCTCGACAAACCCACGCGACTCGGGCGTGAAG 2669 Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799 ||| |||||| ||||| |||||| | | || ||||| | || || ||||| || Sbjct 2668 TCGTCCTTGGTGAAGTGCGGCAGGCTGCGGTGGCGGAAGCCGAACGGAATGCGCTTGCCC 2609 Query 302800 TCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTA--AATCACTGCCCT 302857 || || |||||| || | ||||| ||| ||||| || || | || | ||||| Sbjct 2608 TCGACCGACTGCTGGCCGACGCACGCGGACATTTGCGAGATGTTGATGAACGA--GCCCT 2551 Query 302858 TGGAGCCAGCATTTACCAT 302876 ||||||| ||| | ||||| Sbjct 2550 TGGAGCCGGCAATGACCAT 2532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471752484489661