Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2982 163 3e-35 seq2983 159 4e-34 >seq2982 Length=6182 Score = 163 bits (180), Expect = 3e-35 Identities = 373/565 (66%), Gaps = 35/565 (6%) Strand=Plus/Minus Query 146802 GTGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCAC 146861 |||||| || ||||| || | || || || || | ||||||||| |||| ||| Sbjct 1997 GTGCGGCTGATAGCCAATGACCTCGAAGTCGTCCGCTCGGAAATCGTCAATGTTGCTCAC 1938 Query 146862 CCGCCTCAAAATCTTGAGCT-TGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCA 146920 || | ||| |||| | ||||||||| || || | | |||||| | || Sbjct 1937 GTCCCGCTTAAT-TTGAATTGTGGGGAAGGCCCGAGGCTCGCGCATCAGCTGCTGCTGCA 1879 Query 146921 GGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCG 146980 | ||||| | |||| |||||| ||||| ||||| |||| || || || || ||| Sbjct 1878 GCGGCTCGATATGGTCGAGGTACACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGCCG 1819 Query 146981 GCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGA 147040 || | || || ||||| || | | || |||||| |||| |||||| || ||||||| Sbjct 1818 CCTCACATCCCGTGACGTGCGCAATGAGGTGGGTGAGTAGCGCGTAGCTCGCAATGTTGA 1759 Query 147041 AGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCT------ 147094 |||| || |||| ||||| || | ||| | |||||||| |||||||||||||| Sbjct 1758 AGGGCACGCCCAAGCCCAGATCGCACGAGCGCTGGTACATCTGGCACGAGAGCTGCGGCT 1699 Query 147095 ----CCC------------------CGTCGGC-----CACGTAAAACTGGCACAGGATGT 147127 ||| |||||| ||| | || ||||| || |||| Sbjct 1698 TGCGCCCTGCCGCCGCCTCCTCAAGGGTCGGCGGGGTAACGAAGAATTGGCAAAGAATGT 1639 Query 147128 GGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCC 147187 | || ||||||| |||||| |||| ||| | |||||||| || |||| || | | Sbjct 1638 GACAGGGCGGCAAGGCCATGAGTGGCATGTCAGGTGGGTTCCATGCAGAGAGCAGAATGC 1579 Query 147188 GCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCT 147247 | | | | ||| ||| |||| || | | || ||| | ||||||||| || |||| Sbjct 1578 GGCGGTCCGTGGGATTCGTCTTGATTTGATGAATGACCTGCGCCAGCTGGTCGACACCCT 1519 Query 147248 GGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGC 147307 | ||| ||||| || || || ||||| |||| || ||||||| ||| ||||| | Sbjct 1518 GTCCCGTGTAGTCAGTGTCGGCATCAACGTATTTGGCGCCGAAGTGCCGCCATTGGAAAC 1459 Query 147308 CGTACACTGGCCCCAGGTCGCCGGG 147332 | || || || |||| |||||| || Sbjct 1458 CATATACCGGACCCAAGTCGCCCGG 1434 >seq2983 Length=6149 Score = 159 bits (176), Expect = 4e-34 Identities = 480/738 (65%), Gaps = 45/738 (6%) Strand=Plus/Minus Query 146802 GTGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTC-CTC-C 146859 |||||| | ||||| || |||| || || | | ||||||||| |||| ||| | Sbjct 1997 GTGCGGCTCATAGCCAATGACCTCAAAGTCGTCCACGCGGAAATCGTCAATGTTGCTCAC 1938 Query 146860 A-CCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTT 146918 | |||| | |||||| | ||||||||||||| || | | |||||| | Sbjct 1937 ATCCCGTTT---AATCTTAATTGTGGGGAAGGGTCGCGGCTCGCGCATCAGCTGCTGCTG 1881 Query 146919 CAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCC 146978 || ||||| | ||||||||||| ||||| ||||| |||| || || || || | Sbjct 1880 CAACGGCTCAATATGGTTGAGGTATACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGC 1821 Query 146979 CGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTT 147038 || | || ||||| || || | | || |||||| |||| || || || ||||| Sbjct 1820 CGCTTCGCATCCCGTCACATGTGCGATGAGGTGGGTGAGTAGCGCATAACTTGCAATGTT 1761 Query 147039 GAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCC-- 147096 |||||| || |||| |||| || | ||| | |||||||| |||||| ||||||| | Sbjct 1760 GAAGGGCACGCCCAACCCCAGATCGCACGAGCGCTGGTACATCTGGCATGAGAGCTGCGG 1701 Query 147097 --------------CCG------------TCGGCCACGTAA-----AACTGGCACAGGAT 147125 ||| ||||| || | || ||||||| ||| Sbjct 1700 CTTGCGTCCCACCGCCGCCTCTTCAGGGTTCGGCAGGGTGACAAAGAATTGGCACAAGAT 1641 Query 147126 GTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAG 147185 || || || |||| |||||| || ||||| | |||||||| || |||| ||| | Sbjct 1640 ATGACAGGGTGGCAATGCCATGAGCGGTAGGTCAGGCGGGTTCCATGCGGAGAGCACAAT 1581 Query 147186 CCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCC 147245 || | | ||||||| |||| || | | || ||| ||||||||| || || Sbjct 1580 GCGGCGGTCAGTGGGGTTCGTCTTGATTTGATGAATGACCTGTGCCAGCTGGTCTACACC 1521 Query 147246 CTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAA 147305 ||| ||| |||| || || ||| |||||| ||| |||||||||| ||| ||||| Sbjct 1520 CTGCCCCGTATAGTCGGTGTCGGCGTCGACGTACTGGGCGCCAAAGTGCCGCCATTGGAA 1461 Query 147306 GCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGC-CCGCTTGAGAA 147364 ||||||||| || |||| |||||| || | ||| | || |||| | | ||| | Sbjct 1460 GCCGTACACCGGTCCCAAGTCGCCCGGACGACGGTGTCCG-AGTCCGCGACTCGCGAGGA 1402 Query 147365 ACTCGGGGGACCCGTGGGCGTCCCAGATGCCCAC--TCCCTTGGCGGAGAGCTCCTTAGA 147422 | |||| ||| || | | | ||||||||| ||| | | | | | ||| || | Sbjct 1401 ATTCGGCGGAGCCATTGCCATCCCAGATGTGCACGTTGCGCT--CCGCCAGCCAGTTGGC 1344 Query 147423 GTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCT 147482 |||||| |||| || |||||||| ||||| || | || || | | || || | Sbjct 1343 ATCCGTGTTGCCCGAAATAAACCAGAGAAGCTCTTCGAGTACGCCACGGAAGAAAACGCG 1284 Query 147483 CTTGGTGGTCAGCAGGGG 147500 |||||||| ||||| || Sbjct 1283 TTTGGTGGTGAGCAGCGG 1266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583462815199200