Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq3352 113 4e-20 seq2003 98.7 9e-16 seq1131 98.7 9e-16 seq1959 87.8 2e-12 seq990 82.4 7e-11 >seq3352 Length=3025 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| || | ||| |||||| || |||||||| ||| | || || |||| || Sbjct 2499 CACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTC 2440 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| |||||||| || | |||||||||||||| || | | |||||||||| Sbjct 2439 GAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 2380 Query 35647 GATCTTTTGCTTCA-GAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 || ||| ||| | || | | | |||||||||||| || ||||| | ||||||||| | Sbjct 2379 GACCTTGGACTTGACGACGT-CGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCT 2321 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||||| | || || | || || ||||| Sbjct 2320 TGCCCGTGAGCGTCTTGATGAAGATTTGCAT 2290 >seq2003 Length=103857 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | ||| |||||| ||||||||||| || | || || | || || Sbjct 24525 ACCAAATGAAGCGTCGACTCCTTCTGAATGTTGTAGTCACTGAGCGTGCGGCCATCCTCA 24466 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || ||||| |||| ||||| ||||||| ||||| || |||||||||| Sbjct 24465 AGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 24406 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||| | | | | |||||| || || || || | |||||| || || Sbjct 24405 ATCTTCGCCTTGACGTTCTCGATCGTGTCCGAGGACTCAACTTCGAGCGTGATAGTCTTG 24346 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | ||| || || || | ||||| Sbjct 24345 CCCGTAAGAGTCTTGACGAAGACTTGCAT 24317 >seq1131 Length=1851 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| ||| || || || | || || |||||||| || ||||| Sbjct 1851 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTGCTTGCCAGCAAA 1792 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| |||| | |||||||||| |||||| ||| | | Sbjct 1791 GATAAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 1732 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | ||| ||||| || || |||| || || || Sbjct 1731 CTCGATCGTGTCCGAGGACTCGACCTCGAGCGTAATCGTCTTTCCTGTCAGGGTCTTAAC 1672 Query 35725 AAATATCTGCAT 35736 || | |||||| Sbjct 1671 GAAAACCTGCAT 1660 >seq1959 Length=18094 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| ||| || || || | || || ||||||||||| ||||| Sbjct 133 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTGCTTACCAGCAAA 74 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 |||| ||||| ||||||| |||| || |||||||||| ||||| Sbjct 73 GATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTT 26 >seq990 Length=2172 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || || ||| |||| || |||||||| || ||||| Sbjct 310 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAA 251 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 || | ||||||||||||| || | || |||||| ||| |||||| Sbjct 250 GATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTATCCTGGATCTT 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450774142621240