Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2003 109 5e-19 seq3426 105 6e-18 seq990 105 6e-18 seq3352 86.0 5e-12 >seq2003 Length=103857 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | |||||||| | ||| || || || ||||| |||||||| || Sbjct 24543 CCACCGCGGAGGCGGAGAACCAAATGAAGCGTCGACTCCTTCTGAATGTTGTAGTCACTG 24484 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || || ||||| || || || | || ||||||||||| ||||| || Sbjct 24483 AGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGGA 24424 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||| || | | | || | ||||| | || |||||| Sbjct 24423 ATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTCTCGATCGTGTCCGAGGACTCAACT 24364 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || |||| |||||||| ||||| || || |||| ||||||| Sbjct 24363 TCGAGCGTGATAGTCTTGCCCGTAAGAGTCTTGACGAAGACTTGCATA 24316 >seq3426 Length=2638 Score = 105 bits (116), Expect = 6e-18 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| ||||| || | || | |||||| || || || || |||||||||||| Sbjct 341 CCGCCGCGCAGGCGCAAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTC 282 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | ||||| |||| |||||||| || ||||| | ||||| ||||| ||||| ||||| Sbjct 281 AGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGA 222 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCA 27171 | ||||| || || ||||||| ||||| Sbjct 221 ATGCCCTCCTTGTCCTGGATCTTGGCTTTCA 191 >seq990 Length=2172 Score = 105 bits (116), Expect = 6e-18 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| |||| || | || | ||| || || || || || |||||||||||| Sbjct 345 CCGCCGCGCAGGCGCAGGACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 286 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | ||||| |||| |||||||| || ||||| | ||||||||||| || |||||||| Sbjct 285 AGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGCGGG 226 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCA 27171 | ||||| ||||| ||||||| ||||| Sbjct 225 ATGCCCTCCTTATCCTGGATCTTGGCTTTCA 195 >seq3352 Length=3025 Score = 86.0 bits (94), Expect = 5e-12 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 27031 ACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCT 27090 |||| | |||| || | ||| || || || || || ||||||||||| | |||| Sbjct 2506 ACCGAAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGC 2447 Query 27091 CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTT 27150 |||| |||||||| || || || | ||||| ||||| || ||||| || | |||||| | Sbjct 2446 CGTCCTCGAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCT 2387 Query 27151 TATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTA 27210 | || || |||| || | | || | ||||| | | || || || || || | Sbjct 2386 TGTCCTGGACCTTGGACTTGACGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGA 2327 Query 27211 TAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGC 27250 | | |||||||| || || || | ||||||||||| || Sbjct 2326 TCGTCTTGCCCGTGAGCGTCTTGATGAAGATTTGCATGGC 2287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424916517299736