Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2932 145 2e-29 seq2003 134 4e-26 seq1131 104 7e-17 seq1959 95.1 4e-14 >seq2932 Length=6890 Score = 145 bits (160), Expect = 2e-29 Identities = 457/705 (65%), Gaps = 11/705 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| || || || || |||||||| || || ||||| || || ||||| || || ||| Sbjct 3214 GCTATTGGTATTGACTTGGGTACTACCTACTCGTGTGTGGCCGTCTGGCAGAACGACCGT 3155 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || | ||||| || || || || ||| | || ||||| || |||||||| || ||| Sbjct 3154 GTTGAGGTCATTGCCAACGACCAGGGCAACCGTACGACGCCCTCGTACGTTGCCTTCACC 3095 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| | || ||||| | || || || || | || || || | || Sbjct 3094 GACACCGAGCGTCTCATCGGTGACGCCGCCAAGAACCAGGTGGCGATGAACCCGCATAAC 3035 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACA---CA 349434 || || || || || ||||| || || ||| | |||||| || | || || Sbjct 3034 ACCGTCTTCGACGCCAAGCGTCTCATCGGTCGCAAGTTT----GAGGACCCTGAGGTGCA 2979 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 | || | || || | || || || || || | || || || || | || Sbjct 2978 GGCCGACATGAAGCACTGGCCCTTCACCGTCGTCGCCCGCGATGGC---AAGCCCGTCAT 2922 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 |||| || || || || || | || || ||||| || || || | ||||| Sbjct 2921 CCAGGTGGAGTACAAGGGCGAGAAGAAGACCTTCACCCCCGAGGAGATCTCGGCCATGGT 2862 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | || ||| || || || || || || | |||| || || | || || || Sbjct 2861 CCTCACCAAGATGCGCGAGATCGCCGAGGCCTACCTCGGTGGCACCGTCAAGGACGCCGT 2802 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || || || || ||||| || || || | ||||| || || || || ||||| Sbjct 2801 GATCACGGTCCCGGCCTACTTCAACGACTCGCAGCGCCAGGCCACCAAGGACGCTGGTGT 2742 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 |||||||| | || || || | || || || || || || || || || ||||| || Sbjct 2741 GATTGCGGGCCTCAACGTGCTCCGTATCATCAACGAGCCGACCGCCGCCGCGATTGCGTA 2682 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || || || || | | ||| || || || | || || || || | |||||||| Sbjct 2681 CGGTCTCGACAAGAAGTCGGACAGCGAGAAGAACGTGCTCATCTTCGACCTGGGTGGTGG 2622 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 ||| || ||||| || || || || |||| ||||| || || || || || || || || Sbjct 2621 TACCTTCGATGTGTCGCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGGCCACCGC 2562 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGT 349899 ||||| || || || ||||| || || ||||| || || ||||| Sbjct 2561 CGGTGACACGCACCTGGGTGGTGAGGACTTTGACAACCGCCTCGT 2517 >seq2003 Length=103857 Score = 134 bits (148), Expect = 4e-26 Identities = 170/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563 || ||||||||| || | | ||||| | |||||| || ||||| || ||||| || || Sbjct 24550 TTGCATACCACCGCGGAGGCGGAGAACCAAATGAAGCGTCGACTCCTTCTGAATGTTGTA 24491 Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623 ||| | || || ||||| ||||| || || ||||||||||| ||||| || || || Sbjct 24490 GTCACTGAGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTC 24431 Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683 |||||||| || || || |||||||| || || || || || || |||| || || | Sbjct 24430 CGGAGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTCTCGATCGTGTCCGAGGA 24371 Query 140684 TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||||| || || | ||||| || || || || || || || | ||||| Sbjct 24370 CTCAACTTCGAGCGTGATAGTCTTGCCCGTAAGAGTCTTGACGAAGACTTGCAT 24317 >seq1131 Length=1851 Score = 104 bits (114), Expect = 7e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 140546 CTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605 ||| || ||||| || || || | || || ||||| ||||| || || |||||||| Sbjct 1851 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTGCTTGCCAGCAAA 1792 Query 140606 GATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATT 140665 ||| || || ||||| || || ||||| || || || ||||| || || || || || || Sbjct 1791 GATAAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 1732 Query 140666 ATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || |||| || || | || || || || |||| |||||||| || || || || || Sbjct 1731 CTCGATCGTGTCCGAGGACTCGACCTCGAGCGTAATCGTCTTTCCTGTCAGGGTCTTAAC 1672 Query 140726 AAAAATCTGCAT 140737 |||| |||||| Sbjct 1671 GAAAACCTGCAT 1660 >seq1959 Length=18094 Score = 95.1 bits (104), Expect = 4e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 140509 TACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAG 140568 |||||||||| | | || || || ||||| || ||||| || ||||| || || || Sbjct 170 TACCACCACGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGC 111 Query 140569 ATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAG 140628 | || || ||||| ||||| || || ||||||||||| || || || || || || | Sbjct 110 TCAGCGTACGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCCGGGG 51 Query 140629 GAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCG 140673 |||| || || || |||||||| || || || || || || |||| Sbjct 50 GAATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTCTCGATCG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515187362777759