Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2003 100 2e-16 seq1082 84.2 1e-11 >seq2003 Length=103857 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| | ||||| || || || ||||| || || ||||| ||||||||||| ||| || Sbjct 24317 ATGCAAGTCTTCGTCAAGACTCTTACGGGCAAGACTATCACGCTCGAAGTTGAGTCCTCG 24376 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||| || || | || || || ||| Sbjct 24377 GACACGATCGAGAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAA 24436 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| ||||| || || || || | ||||| | | || |||||| Sbjct 24437 CAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCAGTGACTACAAC 24496 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || ||||| || | ||||| ||| Sbjct 24497 ATTCAGAAGGAGTCGACGCTTCATTTGGTT 24526 >seq1082 Length=24331 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| | ||||| || ||||||||||| || ||||| || ||||| || || || || Sbjct 24119 ATGCAAGTGTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTCGAGGTCGAGTCGTCG 24178 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || || ||||| || || | || || || || Sbjct 24179 GACACCATCGAGAATGTGAAGGC-CAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 24237 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || |||||||| || || || || | || || | |||| ||||| Sbjct 24238 ACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACGCTCAGCGACTACAA 24297 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 24298 CATCCAGAAGGAGTCGAC 24315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337995375394124