Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264895.1_202015-08-11] 3,453 sequences; 14,347,881 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1082 150 4e-31 seq1131 134 3e-26 seq2003 125 2e-23 seq3352 113 1e-19 seq1959 93.3 1e-13 seq990 86.0 2e-11 >seq1082 Length=24331 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | ||||| || || ||||| || || ||||| ||||||||||| || || ||| Sbjct 24122 CAAGTGTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTCGAGGTCGAGTCGTCGGAC 24181 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| || || ||||| |||||||| || || || ||||||||||| || Sbjct 24182 ACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAG 24241 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| ||||| | || || ||| || ||| || Sbjct 24242 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACGCTCAGCGACTACAACATC 24301 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| ||||| Sbjct 24302 CAGAAGGAGTCGACGCTGCACCTTGT 24327 >seq1131 Length=1851 Score = 134 bits (148), Expect = 3e-26 Identities = 140/184 (76%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 177928 TTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCA 177987 ||||||| || || || |||||||| ||||| || |||||||| || ||| ||||| | Sbjct 1667 TTTTCGTTAAGACCCTGACAGGAAAGACGATTACGCTCGAGGTCGAGTCCTCGGACACGA 1726 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 ||||||||||||| ||||| |||||||| || || || || ||||||||||| || | Sbjct 1727 TCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGCC 1786 Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107 ||||||| || || || ||||| || ||||| | || || ||| || ||| | || | Sbjct 1787 TTATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACGCTGAGCGACTACAACATTCAGA 1846 Query 178108 AAGA 178111 | || Sbjct 1847 AGGA 1850 >seq2003 Length=103857 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | ||||| || ||||| || || || || ||||| ||||| || || ||| ||| Sbjct 24320 CAAGTCTTCGTCAAGACTCTTACGGGCAAGACTATCACGCTCGAAGTTGAGTCCTCGGAC 24379 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||||||||| |||||||||||||| || || || ||||||||||| || Sbjct 24380 ACGATCGAGAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAACAG 24439 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| || ||||| | || || || || ||| | Sbjct 24440 CGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCAGTGACTACAACATT 24499 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || ||| | ||| Sbjct 24500 CAGAAGGAGTCGACGCTTCATTTGGTT 24526 Score = 114 bits (126), Expect = 3e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 177928 TTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCA 177987 ||||||| || ||||| |||||||| |||||||| ||||| || || || ||||| | Sbjct 24050 TTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGTCGAGTCGTCCGACACGA 24109 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 ||||||||||||| |||||| || ||||| || || || ||||||||||| || || | Sbjct 24110 TCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAACAGCGTC 24169 Query 178048 TTATCTTCGCCGGAAA 178063 | ||||| || || || Sbjct 24170 TGATCTTTGCGGGCAA 24185 Score = 96.9 bits (106), Expect = 8e-15 Identities = 119/163 (73%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | ||||| || || || || || || ||||| || | || |||||| || ||| Sbjct 24758 CAAGTCTTCGTCAAGACCCTTACGGGCAAGACGATTACATTGGAAGTGGAATCGTCTGAC 24817 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| || |||||||| || || || || || ||||||||||| || Sbjct 24818 ACCATTGAAAACGTGAAGGCGAAGATTCAAGATAAGGAGGGCATTCCTCCGGACCAACAG 24877 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTC 178086 || || ||||| || || || ||||| || ||||| | |||| Sbjct 24878 CGTCTGATCTTTGCGGGCAAGCAGCTTGAGGATGGCCGCACTC 24920 >seq3352 Length=3025 Score = 113 bits (124), Expect = 1e-19 Identities = 151/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| ||| | || || ||||| || || |||||||| |||||||| || ||| Sbjct 2293 CAAATCTTCATCAAGACGCTCACGGGCAAGACGATCACGCTCGAGGTCGAGTCGAGC--- 2349 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||| |||||| ||| | |||||||| || || ||||| ||||||||| Sbjct 2350 GACACGATCGACGTCGTCAAGTCCAAGGTCCAGGACAAGGAGGGTATCCCCCCGGACCAG 2409 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||| || || || |||||||| || || | || || ||| || ||| Sbjct 2410 CAGCGGCTCATCTTTGCGGGCAAGCAGCTCGAGGACGGCCGCACGCTCAGCGACTACAAC 2469 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || || || || Sbjct 2470 ATCCAGAAGGAGTCGACGCTCCACCTGGT 2498 >seq1959 Length=18094 Score = 93.3 bits (102), Expect = 1e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| |||||||||||||| |||||||||||||| || || || || |||||||| Sbjct 2 GACACGATCGAGAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAA 61 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||| || || || ||||| || ||||| | || || ||| || ||| Sbjct 62 CAGCGCCTGATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGTACGCTGAGCGACTACAAC 121 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 | || || || || || || || || || Sbjct 122 ATTCAGAAGGAGTCGACGCTTCACCTCGT 150 >seq990 Length=2172 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| ||||| || || || ||||| ||||||||||| || || ||||| ||||| || Sbjct 203 AAGATCCAGGATAAGGAGGGCATCCCGCCGGACCAGCAGCGTCTCATCTTTGCCGGCAAG 262 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 |||||||| || || | || || ||| || ||| |||| || || || || ||||| Sbjct 263 CAGCTCGAGGACGGGCGCACGCTGAGCGACTACAACATCCAGAAGGAGTCGACGCTGCAC 322 Query 178125 CTTGT 178129 || || Sbjct 323 CTCGT 327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203677945050882