Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq897 125 2e-23 seq1091 102 2e-16 seq876 93.3 9e-14 >seq897 Length=43580 Score = 125 bits (138), Expect = 2e-23 Identities = 372/572 (65%), Gaps = 9/572 (2%) Strand=Plus/Minus Query 319459 TGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCAC 319518 |||| ||| ||| || || ||| ||||||| ||||||||| || ||||| | || Sbjct 27107 TGGAGAATGTCGGTACACACGTCGTTGAGGAACTTGGAGTCGTGCGAGACAATGATCGAC 27048 Query 319519 GAAACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGA 319578 | || | || || | ||||| || | | |||| | ||||| |||| | Sbjct 27047 GTGGTCTCGGTGAGACTGTTGAGGTAGTCCGTGATCCACTTGACGTTGATCACATCCAAG 26988 Query 319579 TGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGA 319638 ||||| |||||||||||||| || || | | || || | |||| ||||| || || Sbjct 26987 TGGTTCGTCGGCTCGTCAAGCAGAAGAATGTCGGCCTTGAACAGCACCGCACGCGCCAGG 26928 Query 319639 GCGAGTTTCATTTTCCACCCTCCGGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATA 319698 ||||| ||||| ||||| || || || || | |||| || ||| ||||||| | Sbjct 26927 GCGAGCTTCATCTTCCAGCCACCCGAGAGCGCCGTAATGGGACCAGCCTGGCGCTGCTCA 26868 Query 319699 TCAAAGCCAACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTT 319758 || ||||| | | | || ||| || |||| | | | || | || Sbjct 26867 TCGAAGCCCATC--TCCTTGAG------CG-TCTTGGCCGCCGTCTCGTGGTCGACGTTC 26817 Query 319759 ACTTGTTCATCATTGGCAATGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGTCGAGA 319818 | | | || | | |||||||| || || | ||| | || || |||||||| Sbjct 26816 AGGCGCTTGTCGGCGACGATGAAGTCGATAATGGAAATGTCACCCTCCGAGCCGTCGAGG 26757 Query 319819 TCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCCG 319878 ||||| || ||||| || || | || | |||||||| || |||| ||| ||| Sbjct 26756 TCGTGCTCGACGTACCAGGTGCGCACCTCGTCGGGCGAGGGGAAGCCCTCAACCTGACCG 26697 Query 319879 TTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAG 319938 ||| || ||||||||||| || || ||||||| ||||| | ||||||||||||||| Sbjct 26696 TTCTGGATGGCGCGCATCAGCGTCGACTTACCCGAACCGTTGCGGCCACACAGACCGTAG 26637 Query 319939 CGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGCC 319998 |||| || || || ||| | | || |||| || ||||| || |||| || || Sbjct 26636 CGGTGGCCACGCTTGAGGCGCAGCGTCGCCGTGTTGAGCAGAATCTTGGCACCGTAGGCG 26577 Query 319999 AGAGAAAATTCACAATCACACAGATCCTCACC 320030 || || || | || | ||||| || |||| Sbjct 26576 AGCGAGAACTGGCAGTTGCACAGGTCGACACC 26545 >seq1091 Length=2794 Score = 102 bits (112), Expect = 2e-16 Identities = 250/368 (68%), Gaps = 12/368 (3%) Strand=Plus/Plus Query 230239 ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCT--AACGAGTTCA 230296 ||||| ||||| ||| ||| ||||||| ||||| ||| ||| |||||| ||| Sbjct 2210 ATCTTCTGGCTCAAGAAGCGCGGTCTGATGCCCGGCCT--GTCGTTCTCGAACGAGCTCA 2267 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAG 230355 || || ||||||||||| || || | | || | | || ||| | | || || Sbjct 2268 TCTCGCGTGACGAGGGTCTGCA-CACCGACTTTGCCTGCCTGCTGTTTGGCCACCTGAAG 2326 Query 230356 AA-CAAGCT-ACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAA 230413 || | || ||| ||| ||||| || | |||||||| || || || | | || Sbjct 2327 AAGCGTGCGCACCC--CGACACGGTGAACCGCATCATTACCGAGGCGGTGGCGATTGAGC 2384 Query 230414 AGGAGTTCATTTGTGACGCTATTCCA-TGTCGCCTTATTGGCATGAACGCTGAACTTATG 230472 |||| ||| ||| || || | || |||||| | ||||||||||| || || ||| Sbjct 2385 AGGATTTCCTTTCGGATGCGCTGCCCGTGTCGC-TGATTGGCATGAATGCGCGCCTGATG 2443 Query 230473 GGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTG 230532 | |||||||| || || || || |||||| | | || || || || || ||| Sbjct 2444 TGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTCGTGGCGCTGGGCAACCCGAAGCAC 2503 Query 230533 TACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAAC 230592 |||||| | | ||||||||| | ||||||||| ||||||||| || || ||| | ||| Sbjct 2504 TACAACGCGACGAACCCCTTCGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAAC 2563 Query 230593 TTCTTCGA 230600 || ||||| Sbjct 2564 TTTTTCGA 2571 >seq876 Length=7149 Score = 93.3 bits (102), Expect = 9e-14 Identities = 371/571 (65%), Gaps = 25/571 (4%) Strand=Plus/Plus Query 281742 GTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCC-TGCAGCCTCGACCCAAACTG 281800 |||||||| || | ||||| || ||| || || ||| || ||| || || ||||| Sbjct 1525 GTGAAGATGTAACGCGCACTGGCCGCGTCCTTGCCGCCCATGGAGCG-CGTACCGAACTG 1583 Query 281801 ACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGAC 281860 || | |||| | | ||| | ||| ||||||||| | | ||||| || ||| ||| Sbjct 1584 GCCGTTGGGCATGAGCATGTTGACGTTGTTGCTCCCGCAGAAGTCCTGCGCAAGGCCGAC 1643 Query 281861 GATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACC 281920 ||| ||| | || || |||||||| |||||| |||| || || || || || Sbjct 1644 GATGGTCATCACCAGGCTCTGGTCGCCGTGGTGGTAGGCGGTGTGCTCCGCGACGTAGCC 1703 Query 281921 ACTGAA-CTG-TGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAATATAAT 281978 ||| | ||| ||| ||||| | || | | | |||||| ||||| || | | | Sbjct 1704 -CTGCAGCTGCTGC-ACCTTGATTTCGGTCTTGAGGTTGCGCTTGAAGCAGCCAAACAGC 1761 Query 281979 ACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAATGCTGCG----TTCCAG 282034 || || || || ||||| || || || || || ||||| ||| ||| || | Sbjct 1762 ACCTTGCGCTGCCCGGGCTTCAAGCCGTCGACCACCGACGGGATGGAGCGGATGTTGTCG 1821 Query 282035 GTCATACCGCGAGAACAAAATAAGTTCCTTGTCAATGAAGTCGGGAACGGGAACCTCGGG 282094 | ||| |||||| | || || ||||||| || ||||||| | ||| | || | | Sbjct 1822 GCCAT----CGAGAAGAGGATCAGCTCCTTGTTGATAAAGTCGGCGATGGGGATCTGGCG 1877 Query 282095 CTTCTTGTGGTCAAGTTGGTTTCCCGGCTCGTA-TGCCGTCATCCACTCCTTGCGATCCT 282153 | |||||| || | | | || ||| | | || || || |||||||||||| || | Sbjct 1878 GATGCGGTGGTCGAGGTAGGTGCCGGGCACAAACTGGCG-CAGCCACTCCTTGCGGTCGT 1936 Query 282154 CGGCCCGAGTCTTGTTGAAAGAACGATCGATGAGCTCTCCAGAATCAGAAGTCCACGT-- 282211 ||||| |||||||||| | | || | ||||| | | | || ||| Sbjct 1937 CGGCCTTCTTCTTGTTGAACGCGAGGTCCACAAGCTCGCGGTCGCCGGGCTTCATCGTCT 1996 Query 282212 -AAACGTCTTCATAAGAGTCTTCAGGTTGCTGAAGTAATGCT---TGGCATCAGTGCTGG 282267 |||| ||| | || | || ||||| |||||| | || || | || | ||| Sbjct 1997 CGAACGAGAGCATGTGCGTGTCCATGTTGCGGAAGTACTTCTTCATGTCCTCCGCCTTGG 2056 Query 282268 AACTCGTACCGAGACCCTTGTAATACTTGAT 282298 | |||||||||||||||||| |||||||| Sbjct 2057 A---CGTACCGAGACCCTTGTAGTACTTGAT 2084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057801040591220