Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1091 518 3e-142 seq1256 152 5e-32 seq785 140 3e-28 seq1529 131 2e-25 seq1084 125 7e-24 >seq1091 Length=2794 Score = 518 bits (574), Expect = 3e-142 Identities = 632/852 (74%), Gaps = 15/852 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||| ||||||| ||||| || || | |||||||| | |||| || Sbjct 1688 GAGCCGCTGCTGGTCGAGAACAAGCGCCGCTTTGTCCTGTTCCCCATCCGCTACCACGAA 1747 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||||||||||||||||| ||||||| | |||||| Sbjct 1748 ATCTGGCAAATGTACAAGAAGGCCGAGGCGTCGTTCTGGACCGCCGAGGAGATTGACCTG 1807 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| | ||||||||| ||| ||||||||||||||||||| || |||| Sbjct 1808 TCCAAGGACCTGCACGACTGGGACAACCGCCTGAACGACAACGAGCGCCACTTTATCAGC 1867 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || || ||||| ||||| || ||||||||||| || | ||||| Sbjct 1868 CACGTCCTTGCGTTCTTTGCCGCGTCGGACGGGATTGTCAACGAGAACCTCTTGGAGCGC 1927 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| |||| ||||||||||| ||||||||||| ||||| ||||| || |||||| || Sbjct 1928 TTCAGCTC-GGAGGTGCAGGCCGCCGAGGCGCGCTGCTTTTACGGTTTCCAGATCATGAT 1986 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 |||||| | |||||||| | || ||| ||||| ||||||||| | ||| |||| Sbjct 1987 TGAGAACATCCACTCGGAGACCTACTCGCTGCTCATTGACACGTACATTCGCGAGCCGGA 2046 Query 116932 GGAGA---AGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | || | ||| |||| || || ||||||||||| ||| || || | ||||| Sbjct 2047 GCAGCGTGAATTCC---TGTTCAATGCGATCGAGACGATCCCGGTGGTGAAGCAAAAGGC 2103 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048 |||||||||||||||||||||| || | | || | ||| |||||||| ||||| Sbjct 2104 CGAGTGGGCGCTGCGCTGGATCAGCGACCGCCGTGCGTCGTTCTCGGAGCGCCTTGTGGC 2163 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 || || |||||||||||| ||||||| ||||| ||||| | || || |||||||| Sbjct 2164 GTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGGTCGTTCGCGTCGATCTTCTGGCTCAA 2223 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| ||||| || |||||||||||| | ||| |||||||||||||| | |||||||| Sbjct 2224 GAAGCGCGGTCTGATGCCCGGCCTGTCGTTCTCGAACGAGCTCATCTCGCGTGACGAGGG 2283 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCG-AGCGCGG 117227 |||||| |||||||||||| ||||||| || || | |||| || | | || Sbjct 2284 TCTGCACACCGACTTTGCCTGCCTGCTGTTTGGCCACCTGAAGAAGCGTGCGCACCCCGA 2343 Query 117228 CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAG 117287 | || || | ||| | ||||| ||||| || || |||||| ||||| | || | Sbjct 2344 CACG-GTGAACCGCATCATTACCGAGGCGGTGGCGATTGAGCAGGATTTCCTTTCGGATG 2402 Query 117288 CGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTC 117346 ||||||| ||| ||| | || | || |||| | ||||| || ||||| ||||| Sbjct 2403 CGCTGCCCGTGTCGCTGATTGGCATGAA-TGCGCGCCTGATGTGCCAGTACATTGAGTTT 2461 Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406 || || ||| | ||||| | | ||||| | | | |||||||||||| || | ||||| Sbjct 2462 GTGGCGGACCGCCTGCTCGTGGCGCTGGGCAACCCGAAGCACTACAACGCGACGAACCCC 2521 Query 117407 CTGGACTTTATG 117418 | ||||||||| Sbjct 2522 TTCGACTTTATG 2533 >seq1256 Length=1729 Score = 152 bits (168), Expect = 5e-32 Identities = 162/211 (77%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||| | || |||||||||||||| || ||||| |||| ||||| | | | Sbjct 1268 ATGCAAATCTTCATCAAGACGCTCACGGGCAAGACGATCACGCTCGAGGTCGAGTCGAGC 1327 Query 40750 GACAGCGTGCAAACGC-TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| || | | | ||||| || | | ||||| |||||||||||| ||||||| Sbjct 1328 GACA-CGATCGACGTCGTCAAGTCCAAGGTCCAGGACAAGGAGGGCATCCCCCCGGACCA 1386 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| |||||||| ||||| || |||| ||||| |||| ||||||||| Sbjct 1387 ACAGCGCCTGATCTTTGCGGGCAAGCAGCTCGAAGACGGCCGCACGCTCAGCGACTACAA 1446 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| | ||||| || || ||| Sbjct 1447 CATCCAGAAGGAGTCGACGCTCCACCTTGTG 1477 >seq785 Length=12362 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || |||||||| || || || ||| |||| ||||| | | Sbjct 242 ATGCAAGTGTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTCGAGGTCGAGTCGTCG 301 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | ||||| |||||||| || ||||||| Sbjct 302 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 361 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || || || ||||| || || | ||||| |||| |||||||||| Sbjct 362 CAGCGCCTGATCTTTGCCGGTAAGCAGCTCGAGGATGGCCGCACGCTCAGCGACTACAAC 421 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | |||||||| || ||| | ||| || | || || Sbjct 422 ATCCAGAAGGAGTCGACGCTGCACCTTGTGCTCCGCCTGCGTGGTGG 468 >seq1529 Length=23778 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| | |||||||| || || || || || || ||||| |||| ||||| | || Sbjct 210 ATGCAGGTTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGTCGAGTCGTCC 151 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| ||| || | ||||| |||||||| ||| ||||||| Sbjct 150 GACACGATCGAGAACG-TCAAGGCAAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCA 92 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| || ||||| ||||| || || | || ||||| | ||||||||| Sbjct 91 ACAGCGCCTTATCTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACCCTGAGCGACTACAA 32 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||||| || Sbjct 31 CATCCAGAAGGAGTCGACGCTTCA 8 >seq1084 Length=2791 Score = 125 bits (138), Expect = 7e-24 Identities = 108/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||| || | || ||||| || ||||||| || ||||| ||||| || Sbjct 269 GACAAGGAGGGCATTCCGCCCGATCAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAG 328 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| |||||| || | |||||||||||||||||||||| | |||||||| || || ||| Sbjct 329 GACGGGCGCACGCTGAGCGACTACAACATCCAGAAGGAGTCTACGCTGCACCTCGTTTTG 388 Query 40903 CGCTTGAGGGGCGG 40916 ||| || | ||||| Sbjct 389 CGCCTGCGCGGCGG 402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515208290233440