Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq946 152 1e-31 seq1376 98.7 2e-15 >seq946 Length=5161 Score = 152 bits (168), Expect = 1e-31 Identities = 405/614 (66%), Gaps = 15/614 (2%) Strand=Plus/Plus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892 ||||| ||||| ||| ||||| || || || | |||||| ||| || || Sbjct 846 TTCAAGACGCTCGAGCGCTCGTACCTGCTGCGCATCAACGGCAAGGTCGCCGAGCGCCCC 905 Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952 ||||||||| | ||||| ||||| || || || ||| ||| | ||||||| || Sbjct 906 CAGCACATGCTCATGCGTGTGGCGGTGGGCATCCACGGCACCGACGTCGAGAGCGCTATC 965 Query 248953 GAGACGTACACCGGAATG--AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCA 249010 |||||||||| | ||| | ||| || | || || ||| | |||||||| |||| Sbjct 966 GAGACGTACAACATGATGTCGGAGAAGGC--CTTTACGCACGCCTCGCCGACGCTTTTCA 1023 Query 249011 ACGCCGGTACCGTCAA-CAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGAC 249069 |||| || | || ||| | ||| || |||||||| || | |||| | |||||| Sbjct 1024 ACGCGGGCA-CGCCAAGCCCCCAGATGTCGTCGTGCTTCCTGGTGTGCATGAAGGACGAC 1082 Query 249070 TCTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAATTCGCGGGC 249129 || |||| ||||| || |||||||| || | |||| ||| || || |||||| Sbjct 1083 TCGATCGAGGGCATCTACGACACGCTCAAGTCGTGTGCGATGATCTCCAAGACGGCGGGC 1142 Query 249130 GGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAAT 249189 || || |||||| | | | |||||| | | ||| |||||||| || || || Sbjct 1143 GGCATTGGTCTCAACATTCACTGCATCCGCGGTACGGGCTCGTACATTGCCGGCACGAAC 1202 Query 249190 GGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATC 249249 || || || | || || || ||| | || || | | ||| || | | | || Sbjct 1203 GGTGTGAGCAACGGCATTGTGCCCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTC 1262 Query 249250 AACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCAC 249303 |||||| || ||||| || |||| ||||| || | || ||||||| Sbjct 1263 GACCAGGGTGGCAACAAGCGCC---CTGGTGCGTTTGCCATCTACCTCGAGCCGTGGCAC 1319 Query 249304 GCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCG 249363 | || | || ||||| | ||| || |||||| ||||||| || || | ||| Sbjct 1320 TCGGACGTGTTTGAGTTTATCGACCTGCGCAAGAACCACGGCAAGGAAGAGGTGCGCGCG 1379 Query 249364 CGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGAC 249423 || ||||| || |||| |||||||| ||||| |||| |||||||| ||| || | | Sbjct 1380 CGCGACCTGTTTTACGCGCTGTGGGTGCCCGACCTGTTTATGCGCCGTGTCGAGCAGGGC 1439 Query 249424 GGCGATTGGACGCT 249437 ||||| |||||||| Sbjct 1440 GGCGACTGGACGCT 1453 >seq1376 Length=1328 Score = 98.7 bits (108), Expect = 2e-15 Identities = 233/341 (68%), Gaps = 12/341 (4%) Strand=Plus/Minus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || || || || ||||||||||| || ||| ||||||| || || Sbjct 1087 TGCTCTTCTACGGCCCGCCGGGCACGGGCAAGACGTCGACGATCATGGCGCTCGCGCGCC 1028 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 |||| || || | || || | | |||||| ||||||||||| || ||||| | Sbjct 1027 GGCTGTACGGGAAGCAGTTCAAGA---ACCACGTGCTGGAGCTGAACGCGTCCGACGACC 971 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCGATTTCGTCGT 254190 |||| | |||||||| |||| |||||||| | ||| | | | | || ||| || Sbjct 970 GCGGCATCGACGTCGTGCGCGGGCAGATCAAGTCGTTCGCGAGCACG-CG-CAACGT-GT 914 Query 254191 TC-CAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACG 254249 || || | || | | | |||||||| | | || |||||||||||| |||||||| Sbjct 913 TCAGCACGCAGCAGGAC-ACGTTCAAGCTGATCGTGCTCGACGAGGCGGACGCCATGACG 855 Query 254250 GCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGAC--GCGTT 254307 | |||||| | || ||||| || ||| ||| | || || | || ||| | Sbjct 854 CAGGCGGCGCAGGCGGCGCTCCGGCGCGTGATCGAGCAGTAC-ACGAAG-AACGTGCGCT 797 Query 254308 TTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCG 254348 | ||| | | ||||||||||| ||||||||| || || Sbjct 796 TCTGCATCATCTGCAACTACGTCAACAAGATCATCCCCGCG 756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073743094571392