Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1091 122 1e-22 >seq1091 Length=2794 Score = 122 bits (134), Expect = 1e-22 Identities = 391/602 (65%), Gaps = 16/602 (3%) Strand=Plus/Minus Query 49950 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 50009 ||||| || || || || ||| ||||||||||||||| | || || ||||| || Sbjct 2314 AAACAGCAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 2255 Query 50010 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCC 50069 |||| || |||||||| || || ||||| || ||||| || || ||||| || ||||| Sbjct 2254 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTGAGCCAGAAGATCGACGCGAACGACCC 2195 Query 50070 AGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC-TGGC-- 50126 || |||||||| || || || |||||||| || ||||| | ||| | | ||| || Sbjct 2194 CGAGAAGAAGATGCCCTCGACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 2136 Query 50127 -GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 50185 || ||| ||||| | ||||| |||||||| | || || || ||||| | Sbjct 2135 GGCGGTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTTTGCTTCACCACCGGGATCGTCT 2076 Query 50186 CTATGGCATTAAAGAGATAGtttttttCATTACT----ATCTTTAACATAAGTATCGATC 50241 | || ||||| || || | || | | || || || || || || || Sbjct 2075 CGATCGCATTGAACAGGAA----TTCACGCTGCTCCGGCTCGCGAATGTACGTGTCAATG 2020 Query 50242 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 50301 | || || | ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 2019 AGCAGCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAG 1960 Query 50302 CTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATT 50361 | ||||||| |||||| || | | || || || | || || || || || Sbjct 1959 CGCGCCTCGGCGGCCTGCACCTCCGAGCTGAAGCGCTCCAAGAGGTTCTCGTTGACAATC 1900 Query 50362 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTT 50421 ||||| || ||||| ||||| | || || | ||||| || |||||| | Sbjct 1899 CCGTCCGACGCGGCAAAGAACGCAAGGACGTGGCTGATAAAGTGGCGCTCGTTGTCGTTC 1840 Query 50422 A---GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAAT 50478 | | || | ||| || | | || || || | || | || || | ||||| || Sbjct 1839 AGGCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAC 1780 Query 50479 GATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACA 50538 || ||||| ||||| || ||||| | |||||| || || || |||| ||||| | ||| Sbjct 1779 GACGCCTCGGCCTTCTTGTACATTTGCCAGATTTCGTGGTAGCGGATGGGGAACAGGACA 1720 Query 50539 AA 50540 || Sbjct 1719 AA 1718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718253590658160