Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1091 104 2e-17 seq1084 89.7 5e-13 >seq1091 Length=2794 Score = 104 bits (114), Expect = 2e-17 Identities = 130/176 (74%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 50663 CGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTG 50722 |||| || | |||||| | || | |||||||| || | |||||||| ||||||||| Sbjct 2397 CGGATGCGCTGCCCGTGTCGCTGATTGGCATGAATGCGCGCCTGATGTGCCAGTACATTG 2456 Query 50723 AGTTTGTTGCAGACAGATTGTTGTTGCAGCTGGGACAACCGAAATACTATAATGC-ACGT 50781 ||||||| || ||| | || | || |||||| | ||||| |||| || || ||| Sbjct 2457 AGTTTGTGGCGGACCGCCTGCTCGTGGCGCTGGGCAACCCGAAGCACTACAACGCGACG- 2515 Query 50782 AACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGA 50837 |||||||| |||||| | ||||| ||| || ||||||| | ||||||||||| Sbjct 2516 AACCCCTTCGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTTTTTCGA 2571 >seq1084 Length=2791 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||||||| | || | ||||| || || || |||||||| ||||||| |||| | | Sbjct 390 CGCAAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCG 331 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || ||||| || || || ||| |||| || || ||||||||||| || ||||| || ||| Sbjct 330 TCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGAATGCCCTCCTTG 271 Query 143090 TC 143091 || Sbjct 270 TC 269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507003663970080