Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1091 334 1e-86 seq946 269 4e-67 >seq1091 Length=2794 Score = 334 bits (370), Expect = 1e-86 Identities = 613/886 (69%), Gaps = 29/886 (3%) Strand=Plus/Plus Query 124994 CCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTT 125053 |||||| |||||| | || || || || ||| |||||||||| ||||| |||| || || Sbjct 1723 CCTGTTCCCCATCCGCTACCACGAAATCTGGCAAATGTACAAGAAGGCCGAGGCGTCGTT 1782 Query 125054 TTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGAC 125113 ||||| | ||| ||| | || ||||||||||||||| |||| ||||| | || ||| Sbjct 1783 CTGGACCGCCGAGGAGATTGACCTGTCCAAGGACCTGCACGACTGGGACAACCGCCTGAA 1842 Query 125114 TGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAAT 125173 || | ||||| | ||||| ||| | | || |||||||||| || || || || Sbjct 1843 CGACAACGAGCGCCACTTTATCAGCCACGTCCTTGCGTTCTTTGCCGCGTCGGACGGGAT 1902 Query 125174 CGTCAACGACAATCTGTTGACACGATTCT-CTCAAGAGTTGACCATTCCA--GAGGTGTC 125230 |||||||| || || ||| || ||| ||| ||| || || || |||| | Sbjct 1903 TGTCAACGAGAACCTCTTGGAGCGCTTCAGCTCG-GAGGTG--CAGGCCGCCGAGGCGCG 1959 Query 125231 GTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACT 125290 ||||||||||| ||||| ||||||||||||||| | |||||||| | ||||| || Sbjct 1960 CTGCTTTTACGGTTTCCAGATCATGATTGAGAACATCCACTCGGAGACCTACTCGCTGCT 2019 Query 125291 GATTGACATGTACATTCGCGATCCG---CAACGTAAACACATGCTCTTTAACGCAATCGA 125347 ||||||| |||||||||||| ||| || ||| || | || || || || ||||| Sbjct 2020 CATTGACACGTACATTCGCGAGCCGGAGCAGCGTGAATTCCTGTTC---AATGCGATCGA 2076 Query 125348 CACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAA 125407 ||| | ||| | ||||||| | |||| | | || |||||| ||| | Sbjct 2077 GACGATCCCGGTGGTGAAGCAAAAGGCCGAGTGGGCGCTGCGCTGGATCAGCGACCGCCG 2136 Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467 | |||| | | || | || ||||| || |||||||| |||||||||||||| ||||| Sbjct 2137 TGCGTCGTTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGG 2196 Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527 || ||| | ||||| ||||||||||||||||| || |||||||| ||| || | Sbjct 2197 GTCGTTCGCGTCGATCTTCTGGCTCAAGAAGCGCGGTCTGATGCCCGGCCTGTCGTTCTC 2256 Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCG 125587 |||||| | || || || |||||||| || ||| ||||||||| || |||||| | Sbjct 2257 GAACGAGCTCATCTCGCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCTGTTTGG 2316 Query 125588 CAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGA 125647 | || ||| | |||| | || || | ||| | | ||| | ||||| Sbjct 2317 CCAC---CTG-AAGAAGCGTGCGCACCC-----CGACACGGTGAACCGCATCATTACCGA 2367 Query 125648 TGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCAT 125707 || ||| ||| || || || || || | || | || || || |||||||||| Sbjct 2368 GGCGGTGGCGATTGAGCAGGATTTCCTTTCGGATGCGCTGCCCGTGTCGCTGATTGGCAT 2427 Query 125708 GAACTGCAAG-CTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGT 125766 ||| ||| | || |||||| ||||||| ||||||||||| || || || || || | Sbjct 2428 GAA-TGCGCGCCTGATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCT---CGTGG 2483 Query 125767 TGATTGG---CCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATAT 125823 | | || || ||| |||||||| | ||| ||||| || || ||| | ||| | Sbjct 2484 CGCTGGGCAACCCGAAGCACTACAACGCGACGAACCCCTTCGACTTTATGGAGAACATTT 2543 Query 125824 CACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTA 125869 | || |||| ||| | |||||||||||| |||||| |||| || Sbjct 2544 CGCTGCAGGGCAAGTCGAACTTTTTCGAGCGCAAGGTCGGCGACTA 2589 >seq946 Length=5161 Score = 269 bits (298), Expect = 4e-67 Identities = 398/561 (71%), Gaps = 2/561 (0%) Strand=Plus/Plus Query 96825 GGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGGC 96884 ||| | ||||| |||||| | ||||||| | | | || ||||| ||||| ||| Sbjct 1215 GGCATTGTGCCCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTCGACCAGGGTGGC 1274 Query 96885 AATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGAC 96944 || || || || || || | ||| ||||| | || || |||||| ||||||| ||||| Sbjct 1275 AACAAGCGCCCTGGTGCGTTTGCCATCTACCTCGAGCCGTGGCACTCGGACGTGTTTGAG 1334 Query 96945 TTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTAT 97004 |||||||| ||||||| ||| ||| ||||||| || || | ||| ||||||| Sbjct 1335 TTTATCGACCTGCGCAAGAACCACGGCAAGGAAGAGGTGCGCGCGCGCGACCTGTTTTAC 1394 Query 97005 GCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTA 97064 || || |||||||| || |||| ||| || ||| | | || ||| |||||| || Sbjct 1395 GCGCTGTGGGTGCCCGACCTGTTTATGCGCCGTGTCGAGCAGGGCGGCGACTGGACGCTG 1454 Query 97065 ATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAG 97124 |||||||||| | | | ||||| ||| |||| |||| |||||||||||||| || | Sbjct 1455 ATGTGCCCCGCCGAGGCGCCCGGCCTGGCCGACTGCTATGGCGAAGAGTTTGACGCGCTG 1514 Query 97125 TACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACGAGAA-CTGTG 97183 ||| | |||||||| |||||||| | | | ||| | || | |||| || || Sbjct 1515 TACGAGCGCTACGAGCGCGAGGGCCGCGGCAAGCGCACCGTCAAGGCGC-AGAAGCTCTG 1573 Query 97184 GAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATAC 97243 | | || ||| | ||| ||| | ||||| || || |||| || |||||||||||| | Sbjct 1574 GTACGCGATCCTCGAGGCGCAGATCGAGACGGGCACGCCGTTTATGCTCTACAAGGATGC 1633 Query 97244 CGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCAC 97303 || ||| ||||| |||||||| || | ||| |||||| |||| || |||||||| Sbjct 1634 CGCGAACCGCAAGAGCAACCAGAAGAACGTCGGCGTGATCAAGAGCTCGAACCTGTGCAC 1693 Query 97304 GGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAA 97363 || ||| | |||||| ||| |||||||||||||| || ||| || || ||| || Sbjct 1694 CGAGATTATGGAGTACAGCTCGCCGGACGAGACGGCGGTGTGCAACCTCGCCTCGATCGC 1753 Query 97364 TCTGCCCAAGTTTGTAGAGGG 97384 || || | |||| | ||||| Sbjct 1754 GCTCCCGACGTTTATCGAGGG 1774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741043508071440