Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1091 102 1e-16 >seq1091 Length=2794 Score = 102 bits (112), Expect = 1e-16 Identities = 388/605 (64%), Gaps = 22/605 (4%) Strand=Plus/Minus Query 33294 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 33353 ||||| || || || || ||| ||||||||||||||| | || || ||||| || Sbjct 2314 AAACAGCAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 2255 Query 33354 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33413 |||| || |||||||| || || ||||| || ||||| || || || ||||| || || Sbjct 2254 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTGAGCCAGAAGATCGACGCGAACGACCC 2195 Query 33414 AGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC------C 33467 || |||||||| || || || || ||||| || | ||| | ||| | | ||| | Sbjct 2194 CGAGAAGAAGATGCCCTCGACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 2136 Query 33468 GGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33527 |||| ||| ||||| | ||||| |||||||| | || || || ||||| Sbjct 2135 GGCG--GTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTTTGCTTCACCACCGGGATCGT 2078 Query 33528 TTCTATGGCATTAAAGAGATAGtttttttCATTACT----ATCTTTAACATAAGTATCGA 33583 || || ||||| || || | || | | || || || || || || | Sbjct 2077 CTCGATCGCATTGAACAGGAA----TTCACGCTGCTCCGGCTCGCGAATGTACGTGTCAA 2022 Query 33584 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 33643 | | || || | ||||| || ||||| ||||| ||||| || ||||| || | Sbjct 2021 TGAGCAGCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGC 1962 Query 33644 ATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTA 33703 | | ||||||| ||| || || | | || || ||| | || || || || | Sbjct 1961 AGCGCGCCTCGGCGGCCTGCACCTCCGAGCTGAAGCGCTCCAAGAGGTTCTCGTTGACAA 1902 Query 33704 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTG 33763 | ||||| || ||||| ||||| | || || | ||||| | |||| || | Sbjct 1901 TCCCGTCCGACGCGGCAAAGAACGCAAGGACGTGGCTGATAAAGTGGCGCTCGT-TGTCG 1843 Query 33764 TT----AGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAA 33819 || | || | ||| || | | || || || | || | || || | ||||| Sbjct 1842 TTCAGGCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAG 1783 Query 33820 AATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATA 33879 || || ||||| ||||| || ||||| | |||||| || | || |||| ||||| | Sbjct 1782 AACGACGCCTCGGCCTTCTTGTACATTTGCCAGATTTCGTGGTAGCGGATGGGGAACAGG 1723 Query 33880 ACAAA 33884 ||||| Sbjct 1722 ACAAA 1718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622934009093040