Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq876 104 3e-17 seq1029 93.3 5e-14 seq808 91.5 2e-13 >seq876 Length=7149 Score = 104 bits (114), Expect = 3e-17 Identities = 148/203 (73%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 126180 GGTGTAAATGTAGCGGGGAGCTGCCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAACTG 126239 |||| | ||||| || | | |||| |||||||| ||| | ||||| || ||||| Sbjct 1524 GGTGAAGATGTAACGCGCACTGGCCGCGTCCTTGCCGCCCATGGAGCGCGTACCGAACTG 1583 Query 126240 ACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACA-AAGTCCTGCGCAAACTTGA 126298 |||| ||| | || | || |||||| ||||| || ||||||||||||| || Sbjct 1584 GCCGTTGGGCATGAGCATGTTGACGTTGTTG-CTCCCGCAGAAGTCCTGCGCAAGGCCGA 1642 Query 126299 CAATGGTC-TCGCACAGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAG 126357 | |||||| || | |||| |||| |||||||| | |||| |||| ||||| || |||||| Sbjct 1643 CGATGGTCATCAC-CAGGCTCTGGTCGCCGTGGTGGTAGGCGGTGTGCTCCGCGACGTAG 1701 Query 126358 CCGCTCAGCTGCGCAACCTTGAT 126380 || ||||||| |||||||| Sbjct 1702 CCCTGCAGCTGCTGCACCTTGAT 1724 >seq1029 Length=86616 Score = 93.3 bits (102), Expect = 5e-14 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 15018 TCGTAAAGGTTGTCATTGGCCAGATGCGCACGCCCGAGATTGGCGACAAGTTTTGCTC-T 15076 |||| |||| |||| |||||| |||| |||||| | ||||||||||| | ||| Sbjct 11832 TCGTCAAGGCCCTCATCCGCCAGACGCGCCGTCCCGAGCTGGGCGACAAGTTCTCCTCGC 11773 Query 15077 GGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCCCAGGAAGACATGCCCTTTACC 15136 | | ||| ||||||||| ||| || |||| | | ||||| |||||||| || ||| Sbjct 11772 GCCACGGC-CAAAAGGGCGTGTGTGGGCTGATCGTGCAGCAGGAGGACATGCCGTTCACC 11714 Query 15137 GCGTCAGGCATGACGCCCGACATTATCATCAACCCCAACTGCATCCCGTCCCGCATGACC 15196 | ||||| || ||||| ||||| ||||| || || ||||||| ||||||||| Sbjct 11713 GACCAGGGCATCTGCCCGGACATCATCATGAACCCGCACGGCTTCCCGTCGCGCATGACC 11654 Score = 87.8 bits (96), Expect = 2e-12 Identities = 165/243 (68%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 15407 GGACCGACGTACTATCACCGACTCAAACACATGGTAAAGGACAAGATGCACGCGCGATCG 15466 || |||| ||||| || |||||| |||||||| | ||||||||||||||| || || Sbjct 11458 GGCCCGATTTACTACCAGAAACTCAAGCACATGGTCATGGACAAGATGCACGCCCGCGCG 11399 Query 15467 CACGGACAGGTGACGACGCTCCATCGCCAGCCCAACTGCGGTCGATCGCAAGGCGGTGGC 15526 | || | | || |||| |||||||| | | || || |||| | ||||||| Sbjct 11398 CGGGGGCCGCGCGCGGTGCTCACGCGCCAGCCGACCGAGGGGCGCTCGCGCGACGGTGGC 11339 Query 15527 CTCCGCTTTGGAGAGATGGAAAAGGACTGCATTCTGGTGCACGGCGCCACCCAATTCCTC 15586 || || | || |||||||| |||||| | | | | |||||||||| || | ||| Sbjct 11338 CTGCGTCTCGGCGAGATGGAGCGCGACTGCCTGATCGGGTACGGCGCCACGCAGCTTCTC 11279 Query 15587 AACGAGCGCATGTTTCTCAACAGTGACCCGTTCCAGATTGACGTGTGCAAAGACTGCGGC 15646 ||||||| | | ||| | ||| |||| | | |||||||| | | |||||| Sbjct 11278 CTCGAGCGCCTCATGATCAGCTCGGACGCGTTTGTGGTGCACGTGTGCGAGCAGTGCGGC 11219 Query 15647 ATG 15649 || Sbjct 11218 CTG 11216 >seq808 Length=110902 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 15059 GGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCCCAG 15118 |||||||||||| || || | ||||||||| ||| |||||| | | || ||| Sbjct 61030 GGCGACAAGTTTGCGTCGCGTCACGGGCAAAAGGGTACGGTCGGCATCACCTACCGCCAA 61089 Query 15119 GAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAACCCCAACTGC 15178 || || ||||||| ||||| ||||| ||||||||||| ||||||||||| || | Sbjct 61090 GAGGATTTGCCCTTCACCGCCGAGGGCATCACGCCCGACATCATCATCAACCCGCACGCC 61149 Query 15179 ATCCCGTCCCGCATGACCAT 15198 |||||| || |||||||| Sbjct 61150 ATCCCGAGTCGTATGACCAT 61169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611379053774400